Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 Y_RNA.333-201ENST00000365274 102 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 MIR200C-201ENST00000384980 68 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 RNA5SP118-201ENST00000410385 109 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 RNU2-8P-201ENST00000410727 190 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 RPL30P2-201ENST00000414021 291 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 MTND3P17-201ENST00000416968 344 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AL445669.1-201ENST00000426743 755 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AC006989.1-201ENST00000427212 131 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 ISCA1P6-201ENST00000427740 390 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AC105402.2-201ENST00000438503 358 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 PPIAP3-201ENST00000450588 505 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 SNRPGP6-201ENST00000451124 220 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 BTF3P5-201ENST00000457252 467 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 RPS4XP2-201ENST00000458402 793 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 RNU7-136P-201ENST00000458819 69 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 RPL7L1P8-201ENST00000469911 741 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 MTND1P3-201ENST00000484956 952 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 FAM172BP-201ENST00000487497 1089 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AC005726.1-201ENST00000494679 427 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 Y_RNA.672-201ENST00000516289 104 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 Y_RNA.704-201ENST00000516851 102 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 HSPA8P13-201ENST00000523715 472 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 DEFB109D-201ENST00000529497 240 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AL161713.1-201ENST00000555538 145 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AL157394.1-201ENST00000562983 1224 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AC034268.2-201ENST00000571784 482 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AC067852.3-201ENST00000589177 561 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 HMGN1P30-201ENST00000589286 268 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AC011816.2-201ENST00000607089 556 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AC010338.1-201ENST00000621823 717 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AC112200.1-201ENST00000625015 234 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AC068647.1-201ENST00000489539 2265 ntBASIC4.37□□□□□ -1.71
SALL3Q9BXA9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SALL3Q9BXA9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SALL3Q9BXA9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SALL3Q9BXA9 AC090229.1-201ENST00000590983 1609 ntBASIC4.37□□□□□ -1.71
SALL3Q9BXA9 GNG5P1-201ENST00000255500 204 ntBASIC4.37□□□□□ -1.71
SALL3Q9BXA9 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SALL3Q9BXA9 RNA5SP387-201ENST00000364226 106 ntBASIC4.37□□□□□ -1.71
SALL3Q9BXA9 Y_RNA.409-201ENST00000383990 98 ntBASIC4.37□□□□□ -1.71
SALL3Q9BXA9 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.37□□□□□ -1.71
SALL3Q9BXA9 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.37□□□□□ -1.71
SALL3Q9BXA9 SDCBPP3-201ENST00000419629 891 ntBASIC4.37□□□□□ -1.71
SALL3Q9BXA9 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.37□□□□□ -1.71
SALL3Q9BXA9 AL589872.1-201ENST00000426602 288 ntBASIC4.37□□□□□ -1.71
SALL3Q9BXA9 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.37□□□□□ -1.71
SALL3Q9BXA9 MTND5P14-201ENST00000441481 1267 ntBASIC4.37□□□□□ -1.71
SALL3Q9BXA9 RPS3AP46-201ENST00000448352 682 ntBASIC4.37□□□□□ -1.71
SALL3Q9BXA9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.37□□□□□ -1.71
SALL3Q9BXA9 RPS15AP1-201ENST00000457423 391 ntBASIC4.37□□□□□ -1.71
SALL3Q9BXA9 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SALL3Q9BXA9 AC026333.2-201ENST00000542164 106 ntBASIC4.37□□□□□ -1.71
SALL3Q9BXA9 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.37□□□□□ -1.71
SALL3Q9BXA9 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.37□□□□□ -1.71
SALL3Q9BXA9 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.37□□□□□ -1.71
SALL3Q9BXA9 AL162413.1-201ENST00000603198 110 ntBASIC4.37□□□□□ -1.71
SALL3Q9BXA9 AL391646.1-201ENST00000603860 190 ntBASIC4.37□□□□□ -1.71
SALL3Q9BXA9 AC078899.5-201ENST00000612475 178 ntBASIC4.37□□□□□ -1.71
SALL3Q9BXA9 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.37□□□□□ -1.71
SALL3Q9BXA9 MIR3662-201ENST00000637030 95 ntBASIC4.37□□□□□ -1.71
SALL3Q9BXA9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.37□□□□□ -1.71
SALL3Q9BXA9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.37□□□□□ -1.71
SALL3Q9BXA9 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SALL3Q9BXA9 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SALL3Q9BXA9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.36□□□□□ -1.71
SALL3Q9BXA9 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.36□□□□□ -1.71
SALL3Q9BXA9 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SALL3Q9BXA9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SALL3Q9BXA9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SALL3Q9BXA9 ZNF285B-201ENST00000561698 1767 ntBASIC4.36□□□□□ -1.71
SALL3Q9BXA9 RNU6-777P-201ENST00000364265 104 ntBASIC4.36□□□□□ -1.71
SALL3Q9BXA9 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
SALL3Q9BXA9 MIR708-201ENST00000390708 88 ntBASIC4.36□□□□□ -1.71
SALL3Q9BXA9 RPL31P1-201ENST00000398116 372 ntBASIC4.36□□□□□ -1.71
SALL3Q9BXA9 AL035410.1-201ENST00000427409 427 ntBASIC4.36□□□□□ -1.71
SALL3Q9BXA9 AC133104.1-201ENST00000429100 218 ntBASIC4.36□□□□□ -1.71
SALL3Q9BXA9 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.36□□□□□ -1.71
SALL3Q9BXA9 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.36□□□□□ -1.71
SALL3Q9BXA9 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.36□□□□□ -1.71
SALL3Q9BXA9 AC010655.1-201ENST00000449336 292 ntBASIC4.36□□□□□ -1.71
SALL3Q9BXA9 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms