Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC006504.3-201ENST00000586818 523 ntBASIC3.04□□□□□ -1.92
CCDC28BQ9BUN5 AC006329.2-201ENST00000611491 394 ntBASIC3.04□□□□□ -1.92
CCDC28BQ9BUN5 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CCDC28BQ9BUN5 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.04□□□□□ -1.92
CCDC28BQ9BUN5 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.04□□□□□ -1.92
CCDC28BQ9BUN5 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC28BQ9BUN5 AC244258.1-201ENST00000637553 1071 ntBASIC3.04□□□□□ -1.92
CCDC28BQ9BUN5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC28BQ9BUN5 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC28BQ9BUN5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC28BQ9BUN5 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC28BQ9BUN5 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 ZNF285B-201ENST00000561698 1767 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 AL672167.1-206ENST00000356293 943 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 Y_RNA.77-201ENST00000362962 107 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 RNU6-343P-201ENST00000364709 104 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 SNORA5A-201ENST00000384111 134 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 MT-TH-201ENST00000387441 69 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 RNU1-101P-201ENST00000391171 127 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 TPMTP3-201ENST00000411928 735 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 RPL7P8-201ENST00000411964 730 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 MRPL50P2-201ENST00000416821 482 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 RPL7P10-201ENST00000417407 739 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 SYF2P2-201ENST00000417620 583 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 AL117351.1-201ENST00000438864 766 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 AC017015.1-201ENST00000477387 286 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 ACTR3P3-201ENST00000480448 893 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 OR2A20P-203ENST00000498397 1268 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 RNU6-27P-201ENST00000516146 107 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 AP004247.1-201ENST00000531556 1289 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 ACTR3BP3-201ENST00000565577 979 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 OR2AS2P-201ENST00000606902 342 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 AC107214.2-201ENST00000608204 634 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 AC012360.2-201ENST00000609349 391 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 AC090617.7-201ENST00000623952 126 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 AC091925.2-201ENST00000625059 256 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 AC092192.1-201ENST00000633154 1018 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.03□□□□□ -1.92
CCDC28BQ9BUN5 AC092447.10-201ENST00000620607 1652 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 OR1S2-201ENST00000302592 978 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 RNU6-289P-201ENST00000364093 107 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 RNU6-777P-201ENST00000364265 104 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AC110754.1-201ENST00000399740 601 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 HSFY4P-201ENST00000415994 1181 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AL389915.1-201ENST00000422463 466 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 RPS27AP14-201ENST00000422868 454 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AC108734.1-201ENST00000439549 399 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 Z95327.1-201ENST00000446082 482 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 KATNBL1P6-201ENST00000453433 915 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 ZNF114P1-201ENST00000453500 292 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AC008571.1-201ENST00000467232 300 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 RN7SL633P-201ENST00000488974 297 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 COX7A2P2-201ENST00000505291 250 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 MTCO2P32-201ENST00000514865 403 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AC024224.1-201ENST00000538284 609 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 ROCK1P1-201ENST00000573767 549 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AP000403.1-201ENST00000603349 851 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AC064807.4-201ENST00000607201 407 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AC097468.3-201ENST00000607956 456 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AL121772.2-201ENST00000614331 297 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 Z69908.1-201ENST00000622603 247 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms