Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 MAPK10-322ENST00000641485 4530 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AP003122.5-201ENST00000527668 3766 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AL161781.1-201ENST00000354277 403 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 SNORA63.1-201ENST00000362493 131 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 RNA5SP267-201ENST00000364893 126 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 RNU6-744P-201ENST00000365557 107 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 RNU6-1316P-201ENST00000384242 108 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 U3.19-201ENST00000390893 196 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 MIR887-201ENST00000401258 79 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AL354719.1-201ENST00000406535 843 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AL031121.1-201ENST00000406553 254 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 SNORD88.1-201ENST00000408684 91 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 RNU2-43P-201ENST00000410306 190 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 RNA5SP344-201ENST00000411081 104 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 RPL21P40-201ENST00000428586 483 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 RPL26P6-201ENST00000440913 438 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AP000542.1-201ENST00000448473 371 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 RPL23AP31-201ENST00000456160 467 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 SNORA84-201ENST00000459229 133 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 HMGN2P13-201ENST00000476476 274 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AC006483.1-201ENST00000487308 313 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 OR2A20P-203ENST00000498397 1268 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 CBX3P3-201ENST00000508108 532 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AC093809.1-201ENST00000509155 340 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AC093281.2-201ENST00000510153 597 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AC024589.1-201ENST00000512207 263 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AC022483.1-201ENST00000514020 567 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 RNU6-1129P-201ENST00000515964 104 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 DUXAP2-201ENST00000519198 589 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AC087276.1-201ENST00000529659 480 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AP000857.1-201ENST00000532151 543 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AL133271.1-201ENST00000538229 291 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 MTCO3P24-201ENST00000572729 782 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AC013444.2-201ENST00000603317 787 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 Z99289.3-201ENST00000605586 594 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AC090115.4-201ENST00000609970 188 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AL450472.3-201ENST00000615578 367 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 Z99129.2-201ENST00000619967 314 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 AC010338.1-201ENST00000621823 717 ntBASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.41□□□□□ -2.02
HDHD3Q9BSH5 ZNF807-201ENST00000328088 1707 ntBASIC2.4□□□□□ -2.02
HDHD3Q9BSH5 AL672167.1-206ENST00000356293 943 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 SNORA71.1-201ENST00000364523 117 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 SNORA9.2-201ENST00000365361 133 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 RNVU1-14-201ENST00000384770 164 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 MIR449B-201ENST00000384995 97 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 SAR1AP2-201ENST00000392696 594 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 RPS3AP24-201ENST00000407896 734 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 RAP1BP1-201ENST00000412709 553 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 RPL21P32-201ENST00000419877 477 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AL035407.1-201ENST00000429211 571 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 SNRPEP7-201ENST00000438350 220 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 RPL21P8-201ENST00000465083 535 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AC003982.1-202ENST00000469928 248 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 RPL9P33-201ENST00000484311 566 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AC068724.1-201ENST00000487100 792 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 SNORA70.16-201ENST00000516390 95 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 RN7SKP282-201ENST00000516824 299 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.4□□□□□ -2.03
HDHD3Q9BSH5 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms