Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.69□□□□□ -1.66
PTPN18Q99952 AC087499.8-201ENST00000578406 226 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 AC010525.2-201ENST00000590920 195 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 SNRPGP17-201ENST00000603780 214 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 AC022106.2-201ENST00000620114 757 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.69□□□□□ -1.66
PTPN18Q99952 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PTPN18Q99952 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN18Q99952 NOL8P1-201ENST00000508336 3529 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN18Q99952 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN18Q99952 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.68□□□□□ -1.66
PTPN18Q99952 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN18Q99952 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PTPN18Q99952 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PTPN18Q99952 RIOK3P1-201ENST00000418778 1528 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN18Q99952 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.68□□□□□ -1.66
PTPN18Q99952 Y_RNA.202-201ENST00000364083 110 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 RNU6-744P-201ENST00000365557 107 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 SNORA20.2-201ENST00000383922 131 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 RNU6-1316P-201ENST00000384242 108 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 MIR1179-201ENST00000408703 91 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.68□□□□□ -1.66
PTPN18Q99952 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.68□□□□□ -1.66
PTPN18Q99952 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.68□□□□□ -1.66
PTPN18Q99952 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.68□□□□□ -1.66
PTPN18Q99952 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.68□□□□□ -1.66
PTPN18Q99952 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN18Q99952 AL356010.1-201ENST00000456364 102 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 snoU13.8-201ENST00000458890 104 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 RNU6-329P-201ENST00000459618 107 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.68□□□□□ -1.66
PTPN18Q99952 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.68□□□□□ -1.66
PTPN18Q99952 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.68□□□□□ -1.66
PTPN18Q99952 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.68□□□□□ -1.66
PTPN18Q99952 AC010587.1-201ENST00000505809 469 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 TMEM248P1-201ENST00000510579 951 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.68□□□□□ -1.66
PTPN18Q99952 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.68□□□□□ -1.66
PTPN18Q99952 RNU6-1170P-201ENST00000515974 106 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.68□□□□□ -1.66
PTPN18Q99952 AC090572.1-201ENST00000519251 160 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 AC007991.1-201ENST00000522680 631 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 IGKV2D-19-201ENST00000523346 262 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.68□□□□□ -1.66
PTPN18Q99952 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.68□□□□□ -1.66
PTPN18Q99952 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.68□□□□□ -1.66
PTPN18Q99952 AC005668.1-201ENST00000571142 476 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 AC090615.1-201ENST00000577519 154 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 MIR4742-201ENST00000581069 85 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.68□□□□□ -1.66
PTPN18Q99952 OR10AB1P-201ENST00000609613 938 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 AC104237.2-201ENST00000612456 443 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 AC138965.3-201ENST00000623875 498 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 AC090617.10-201ENST00000624308 134 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PTPN18Q99952 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN18Q99952 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN18Q99952 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.68□□□□□ -1.66
PTPN18Q99952 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN18Q99952 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN18Q99952 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.68□□□□□ -1.66
PTPN18Q99952 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.68□□□□□ -1.66
PTPN18Q99952 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN18Q99952 AC093535.2-201ENST00000624769 2326 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 AL022322.2-201ENST00000624072 20397 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
PTPN18Q99952 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.68□□□□□ -1.66
PTPN18Q99952 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
PTPN18Q99952 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.68□□□□□ -1.66
PTPN18Q99952 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN18Q99952 AL672167.1-204ENST00000641875 3017 ntBASIC4.67□□□□□ -1.66
PTPN18Q99952 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN18Q99952 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.67□□□□□ -1.66
PTPN18Q99952 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN18Q99952 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.67□□□□□ -1.66
PTPN18Q99952 AC006020.1-201ENST00000420179 1854 ntBASIC4.67□□□□□ -1.66
PTPN18Q99952 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
PTPN18Q99952 SNORA60-201ENST00000362396 134 ntBASIC4.67□□□□□ -1.66
PTPN18Q99952 Y_RNA.184-201ENST00000363884 108 ntBASIC4.67□□□□□ -1.66
PTPN18Q99952 RNU6-463P-201ENST00000384340 107 ntBASIC4.67□□□□□ -1.66
PTPN18Q99952 RNU1-44P-201ENST00000384453 163 ntBASIC4.67□□□□□ -1.66
PTPN18Q99952 SNORD3H-201ENST00000384486 214 ntBASIC4.67□□□□□ -1.66
PTPN18Q99952 MIR218-2-201ENST00000385006 110 ntBASIC4.67□□□□□ -1.66
PTPN18Q99952 RN7SKP177-201ENST00000410567 355 ntBASIC4.67□□□□□ -1.66
PTPN18Q99952 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.67□□□□□ -1.66
PTPN18Q99952 AL645937.1-202ENST00000421799 937 ntBASIC4.67□□□□□ -1.66
PTPN18Q99952 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN18Q99952 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN18Q99952 GPR143P-201ENST00000434155 205 ntBASIC4.67□□□□□ -1.66
PTPN18Q99952 RPS26P2-201ENST00000440331 348 ntBASIC4.67□□□□□ -1.66
PTPN18Q99952 ABCF2P2-201ENST00000450549 296 ntBASIC4.67□□□□□ -1.66
PTPN18Q99952 RN7SL293P-201ENST00000481765 281 ntBASIC4.67□□□□□ -1.66
PTPN18Q99952 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN18Q99952 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN18Q99952 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN18Q99952 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN18Q99952 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN18Q99952 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms