Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RPS23P4-201ENST00000487908 423 ntBASIC1.27□□□□□ -2.21
COL12A1Q99715 HMGN1P28-201ENST00000521340 364 ntBASIC1.27□□□□□ -2.21
COL12A1Q99715 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.27□□□□□ -2.21
COL12A1Q99715 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
COL12A1Q99715 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
COL12A1Q99715 ZNF209P-201ENST00000593450 2304 ntBASIC1.27□□□□□ -2.21
COL12A1Q99715 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
COL12A1Q99715 RNU6-492P-201ENST00000363035 104 ntBASIC1.27□□□□□ -2.21
COL12A1Q99715 HMGN1P14-201ENST00000412459 517 ntBASIC1.27□□□□□ -2.21
COL12A1Q99715 FABP5P3-201ENST00000437960 408 ntBASIC1.27□□□□□ -2.21
COL12A1Q99715 RPS29P29-201ENST00000456396 171 ntBASIC1.27□□□□□ -2.21
COL12A1Q99715 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.27□□□□□ -2.21
COL12A1Q99715 AC098657.3-201ENST00000620434 263 ntBASIC1.27□□□□□ -2.21
COL12A1Q99715 AC010487.4-201ENST00000637027 61 ntBASIC1.27□□□□□ -2.21
COL12A1Q99715 AC012321.1-201ENST00000561622 1588 ntBASIC1.27□□□□□ -2.21
COL12A1Q99715 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
COL12A1Q99715 METTL21EP-201ENST00000298105 713 ntBASIC1.26□□□□□ -2.21
COL12A1Q99715 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.26□□□□□ -2.21
COL12A1Q99715 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.26□□□□□ -2.21
COL12A1Q99715 RPL23AP78-201ENST00000599928 470 ntBASIC1.26□□□□□ -2.21
COL12A1Q99715 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.26□□□□□ -2.21
COL12A1Q99715 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.26□□□□□ -2.21
COL12A1Q99715 MTND4P1-201ENST00000457501 1466 ntBASIC1.26□□□□□ -2.21
COL12A1Q99715 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
COL12A1Q99715 MCTS2P-201ENST00000394552 546 ntBASIC1.26□□□□□ -2.21
COL12A1Q99715 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.26□□□□□ -2.21
COL12A1Q99715 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.26□□□□□ -2.21
COL12A1Q99715 AL358176.2-201ENST00000425769 204 ntBASIC1.26□□□□□ -2.21
COL12A1Q99715 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.26□□□□□ -2.21
COL12A1Q99715 AL078601.1-201ENST00000444542 271 ntBASIC1.26□□□□□ -2.21
COL12A1Q99715 RPS29P20-201ENST00000489592 171 ntBASIC1.26□□□□□ -2.21
COL12A1Q99715 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.26□□□□□ -2.21
COL12A1Q99715 AC008837.2-201ENST00000513076 418 ntBASIC1.26□□□□□ -2.21
COL12A1Q99715 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
COL12A1Q99715 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.26□□□□□ -2.21
COL12A1Q99715 CBX3P8-201ENST00000532412 525 ntBASIC1.26□□□□□ -2.21
COL12A1Q99715 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.26□□□□□ -2.21
COL12A1Q99715 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
COL12A1Q99715 MIR4448-201ENST00000584360 86 ntBASIC1.26□□□□□ -2.21
COL12A1Q99715 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
COL12A1Q99715 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
COL12A1Q99715 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC1.26□□□□□ -2.21
COL12A1Q99715 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.26□□□□□ -2.21
COL12A1Q99715 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
COL12A1Q99715 MIRLET7G-201ENST00000362280 84 ntBASIC1.25□□□□□ -2.21
COL12A1Q99715 AC007560.1-201ENST00000426912 237 ntBASIC1.25□□□□□ -2.21
COL12A1Q99715 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.25□□□□□ -2.21
COL12A1Q99715 RPL34P26-201ENST00000445636 354 ntBASIC1.25□□□□□ -2.21
COL12A1Q99715 RPL23AP62-201ENST00000463396 453 ntBASIC1.25□□□□□ -2.21
COL12A1Q99715 RNU6-113P-201ENST00000516653 101 ntBASIC1.25□□□□□ -2.21
COL12A1Q99715 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.25□□□□□ -2.21
COL12A1Q99715 MIR6715B-201ENST00000637172 77 ntBASIC1.25□□□□□ -2.21
COL12A1Q99715 SNORD48-201ENST00000364953 64 ntBASIC1.25□□□□□ -2.21
COL12A1Q99715 U8.9-201ENST00000365667 134 ntBASIC1.25□□□□□ -2.21
COL12A1Q99715 Y_RNA.471-201ENST00000384312 102 ntBASIC1.25□□□□□ -2.21
COL12A1Q99715 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.25□□□□□ -2.21
COL12A1Q99715 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.25□□□□□ -2.21
COL12A1Q99715 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.25□□□□□ -2.21
COL12A1Q99715 ARL5AP3-201ENST00000439327 386 ntBASIC1.25□□□□□ -2.21
COL12A1Q99715 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.25□□□□□ -2.21
COL12A1Q99715 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.25□□□□□ -2.21
COL12A1Q99715 RNU6ATAC39P-201ENST00000516309 149 ntBASIC1.25□□□□□ -2.21
COL12A1Q99715 RN7SKP265-201ENST00000516448 223 ntBASIC1.25□□□□□ -2.21
COL12A1Q99715 NPM1P52-201ENST00000518264 846 ntBASIC1.25□□□□□ -2.21
COL12A1Q99715 AC011472.4-201ENST00000615848 491 ntBASIC1.25□□□□□ -2.21
COL12A1Q99715 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.25□□□□□ -2.21
COL12A1Q99715 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.25□□□□□ -2.21
COL12A1Q99715 TEX21P-201ENST00000447107 1476 ntBASIC1.25□□□□□ -2.21
COL12A1Q99715 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.25□□□□□ -2.21
COL12A1Q99715 VTRNA1-3-201ENST00000365645 89 ntBASIC1.24□□□□□ -2.21
COL12A1Q99715 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
COL12A1Q99715 MTND1P23-201ENST00000416931 372 ntBASIC1.24□□□□□ -2.21
COL12A1Q99715 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.24□□□□□ -2.21
COL12A1Q99715 AC087190.1-201ENST00000484462 480 ntBASIC1.24□□□□□ -2.21
COL12A1Q99715 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC1.24□□□□□ -2.21
COL12A1Q99715 MIR6078-201ENST00000611069 100 ntBASIC1.24□□□□□ -2.21
COL12A1Q99715 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.24□□□□□ -2.21
COL12A1Q99715 Y_RNA.303-201ENST00000364998 94 ntBASIC1.24□□□□□ -2.21
COL12A1Q99715 BMI1P1-201ENST00000445879 941 ntBASIC1.24□□□□□ -2.21
COL12A1Q99715 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.24□□□□□ -2.21
COL12A1Q99715 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.24□□□□□ -2.21
COL12A1Q99715 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.24□□□□□ -2.21
COL12A1Q99715 SUB1P4-201ENST00000566062 339 ntBASIC1.24□□□□□ -2.21
COL12A1Q99715 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.24□□□□□ -2.21
COL12A1Q99715 MAGOH2P-202ENST00000584384 429 ntBASIC1.24□□□□□ -2.21
COL12A1Q99715 AP002967.1-201ENST00000624203 539 ntBASIC1.24□□□□□ -2.21
COL12A1Q99715 MIR222-201ENST00000384992 110 ntBASIC1.24□□□□□ -2.21
COL12A1Q99715 RPS12P24-201ENST00000412619 387 ntBASIC1.24□□□□□ -2.21
COL12A1Q99715 RNA5SP384-201ENST00000516615 116 ntBASIC1.24□□□□□ -2.21
COL12A1Q99715 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.24□□□□□ -2.21
COL12A1Q99715 PRELID2P1-201ENST00000552837 301 ntBASIC1.24□□□□□ -2.21
COL12A1Q99715 AL158801.5-201ENST00000623123 465 ntBASIC1.24□□□□□ -2.21
COL12A1Q99715 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.24□□□□□ -2.21
COL12A1Q99715 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
COL12A1Q99715 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
COL12A1Q99715 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
COL12A1Q99715 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
COL12A1Q99715 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.23□□□□□ -2.21
COL12A1Q99715 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.23□□□□□ -2.21
COL12A1Q99715 MTCYBP45-201ENST00000435243 565 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms