Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU2-44P-201ENST00000516795 194 ntBASIC1.59□□□□□ -2.15
AP1S3Q96PC3 SNORA31.25-201ENST00000517242 134 ntBASIC1.59□□□□□ -2.15
AP1S3Q96PC3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.59□□□□□ -2.15
AP1S3Q96PC3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
AP1S3Q96PC3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.59□□□□□ -2.15
AP1S3Q96PC3 AC022069.1-201ENST00000582910 658 ntBASIC1.59□□□□□ -2.15
AP1S3Q96PC3 VN1R92P-201ENST00000598511 928 ntBASIC1.59□□□□□ -2.15
AP1S3Q96PC3 AL109918.3-201ENST00000603072 338 ntBASIC1.59□□□□□ -2.15
AP1S3Q96PC3 AC009314.1-201ENST00000603871 304 ntBASIC1.59□□□□□ -2.15
AP1S3Q96PC3 AL022099.1-201ENST00000604551 712 ntBASIC1.59□□□□□ -2.15
AP1S3Q96PC3 AC107294.1-201ENST00000609524 467 ntBASIC1.59□□□□□ -2.15
AP1S3Q96PC3 AC093591.3-201ENST00000634516 308 ntBASIC1.59□□□□□ -2.15
AP1S3Q96PC3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
AP1S3Q96PC3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
AP1S3Q96PC3 AC130650.2-201ENST00000618736 2403 ntBASIC1.59□□□□□ -2.16
AP1S3Q96PC3 AC008432.1-201ENST00000615912 1320 ntBASIC1.59□□□□□ -2.16
AP1S3Q96PC3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.16
AP1S3Q96PC3 MTND5P31-201ENST00000419366 1374 ntBASIC1.59□□□□□ -2.16
AP1S3Q96PC3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.58□□□□□ -2.16
AP1S3Q96PC3 MIR23B-201ENST00000384832 97 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 RNA5SP80-201ENST00000410475 111 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 HMGB1P11-201ENST00000413899 637 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 FCF1P2-201ENST00000415284 583 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 NUP35P1-201ENST00000422734 947 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC1.58□□□□□ -2.16
AP1S3Q96PC3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.58□□□□□ -2.16
AP1S3Q96PC3 RPS20P24-201ENST00000457473 361 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 snoU109.4-201ENST00000458953 143 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 AC072039.1-201ENST00000477611 581 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 AC068781.1-201ENST00000488231 618 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.58□□□□□ -2.16
AP1S3Q96PC3 RN7SL636P-201ENST00000497504 294 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
AP1S3Q96PC3 RNA5SP200-201ENST00000516360 103 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 SNORA70.24-201ENST00000517233 118 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 RPL7P20-201ENST00000520308 745 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.58□□□□□ -2.16
AP1S3Q96PC3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.58□□□□□ -2.16
AP1S3Q96PC3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.58□□□□□ -2.16
AP1S3Q96PC3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.58□□□□□ -2.16
AP1S3Q96PC3 EEF1B2P4-201ENST00000551398 348 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 HSPE1P3-201ENST00000559254 309 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.58□□□□□ -2.16
AP1S3Q96PC3 MIMT1-201ENST00000597105 1050 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 MIR92B-201ENST00000607575 96 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 AC046143.2-201ENST00000609789 160 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 AL627230.6-201ENST00000611129 280 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 AL449363.1-201ENST00000617815 186 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 AC068722.2-201ENST00000618734 544 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.58□□□□□ -2.16
AP1S3Q96PC3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.58□□□□□ -2.16
AP1S3Q96PC3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.58□□□□□ -2.16
AP1S3Q96PC3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
AP1S3Q96PC3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.58□□□□□ -2.16
AP1S3Q96PC3 MTND4P27-201ENST00000450813 1354 ntBASIC1.58□□□□□ -2.16
AP1S3Q96PC3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
AP1S3Q96PC3 RNU6-543P-201ENST00000362576 108 ntBASIC1.57□□□□□ -2.16
AP1S3Q96PC3 RNA5SP68-201ENST00000363885 119 ntBASIC1.57□□□□□ -2.16
AP1S3Q96PC3 SUMO2P12-201ENST00000405924 140 ntBASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AL109913.1-201ENST00000421173 514 ntBASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.57□□□□□ -2.16
AP1S3Q96PC3 EEF1B2P7-201ENST00000451177 676 ntBASIC1.57□□□□□ -2.16
AP1S3Q96PC3 RPS3P1-201ENST00000456781 192 ntBASIC1.57□□□□□ -2.16
AP1S3Q96PC3 MTND4LP3-201ENST00000468320 276 ntBASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AC128713.1-201ENST00000471495 306 ntBASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.57□□□□□ -2.16
AP1S3Q96PC3 RNA5SP148-201ENST00000516527 94 ntBASIC1.57□□□□□ -2.16
AP1S3Q96PC3 RNU2-19P-201ENST00000517288 84 ntBASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.57□□□□□ -2.16
AP1S3Q96PC3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.57□□□□□ -2.16
AP1S3Q96PC3 OR4P1P-201ENST00000530808 1136 ntBASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.57□□□□□ -2.16
AP1S3Q96PC3 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AC012468.1-201ENST00000604888 430 ntBASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AC120053.1-201ENST00000607706 736 ntBASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AC093838.1-201ENST00000613014 469 ntBASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AL450472.3-201ENST00000615578 367 ntBASIC1.57□□□□□ -2.16
AP1S3Q96PC3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
AP1S3Q96PC3 CTSLP2-204ENST00000629029 392 ntBASIC1.57□□□□□ -2.16
AP1S3Q96PC3 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
AP1S3Q96PC3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
AP1S3Q96PC3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.56□□□□□ -2.16
AP1S3Q96PC3 RNU6-1155P-201ENST00000363554 107 ntBASIC1.56□□□□□ -2.16
AP1S3Q96PC3 RNU6-921P-201ENST00000384361 107 ntBASIC1.56□□□□□ -2.16
AP1S3Q96PC3 MIR128-1-201ENST00000384921 82 ntBASIC1.56□□□□□ -2.16
AP1S3Q96PC3 MIR221-201ENST00000385135 110 ntBASIC1.56□□□□□ -2.16
AP1S3Q96PC3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
AP1S3Q96PC3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
AP1S3Q96PC3 AC099548.1-201ENST00000421443 426 ntBASIC1.56□□□□□ -2.16
AP1S3Q96PC3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.56□□□□□ -2.16
AP1S3Q96PC3 AC025750.2-201ENST00000442609 450 ntBASIC1.56□□□□□ -2.16
AP1S3Q96PC3 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms