Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC091179.1-201ENST00000461606 579 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AC004801.2-202ENST00000463559 283 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AC105313.1-201ENST00000509121 353 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AC006445.2-201ENST00000510061 472 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 SNORA31.1-201ENST00000515993 133 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 SNORA31.5-201ENST00000516190 133 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 RNU2-10P-201ENST00000516375 211 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 ATP5F1P5-201ENST00000526403 760 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 TRAV8-5-201ENST00000537369 341 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 MIR3609-201ENST00000582661 80 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AC119751.7-201ENST00000600494 245 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AL161729.3-201ENST00000603533 673 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AL137849.1-201ENST00000604767 169 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AL451064.1-201ENST00000607718 471 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 FRG1KP-201ENST00000623592 341 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AL021368.2-201ENST00000606125 5352 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AL049641.1-201ENST00000441055 1948 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 FAM35CP-201ENST00000554755 2470 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 PWAR6-201ENST00000552334 4618 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 RNU5E-1-201ENST00000362477 120 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 Y_RNA.553-201ENST00000384670 102 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 MIR184-201ENST00000384962 84 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 MIR325-201ENST00000385260 98 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 SOD2P1-201ENST00000396543 562 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC245028.1-201ENST00000423259 256 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC092047.1-201ENST00000424997 240 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC006989.1-201ENST00000427212 131 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 RPL23AP69-201ENST00000431134 458 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AL022238.1-201ENST00000442557 355 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 USP9YP29-201ENST00000445112 563 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AL360221.1-201ENST00000445989 335 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC084198.1-201ENST00000477747 402 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AL135752.1-201ENST00000479477 471 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC010424.1-201ENST00000506336 297 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 NDUFB4P2-201ENST00000509515 391 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 PCBP2P3-201ENST00000509726 843 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 RNU6-927P-201ENST00000516199 100 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 RNA5SP291-201ENST00000517222 105 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 CYCSP29-201ENST00000533731 318 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 ARL2BPP2-201ENST00000550907 489 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 HMGB1P14-201ENST00000557424 591 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 TRAV28-201ENST00000557548 323 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC137800.2-201ENST00000574375 120 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 DUXAP4-201ENST00000603046 613 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 PISRT1-201ENST00000626175 531 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 MTND1P37-201ENST00000636562 264 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 OR5H6-203ENST00000642105 978 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 FAM35BP-202ENST00000497389 3337 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AC092435.3-201ENST00000565538 3654 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CMTM3Q96MX0 AL390237.1-201ENST00000404226 1415 ntBASIC3.36□□□□□ -1.87
CMTM3Q96MX0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 AC006504.1-201ENST00000562493 3666 ntBASIC3.35□□□□□ -1.87
CMTM3Q96MX0 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CMTM3Q96MX0 RNY4P34-201ENST00000364779 95 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms