Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.6□□□□□ -1.99
C9orf72Q96LT7 AC009961.3-201ENST00000449832 765 ntBASIC2.6□□□□□ -1.99
C9orf72Q96LT7 USP9YP34-201ENST00000453983 808 ntBASIC2.6□□□□□ -1.99
C9orf72Q96LT7 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.6□□□□□ -1.99
C9orf72Q96LT7 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
C9orf72Q96LT7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.6□□□□□ -1.99
C9orf72Q96LT7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.6□□□□□ -1.99
C9orf72Q96LT7 AC025881.1-201ENST00000518851 512 ntBASIC2.6□□□□□ -1.99
C9orf72Q96LT7 DEFB108D-201ENST00000527787 222 ntBASIC2.6□□□□□ -1.99
C9orf72Q96LT7 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.6□□□□□ -1.99
C9orf72Q96LT7 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.6□□□□□ -1.99
C9orf72Q96LT7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.6□□□□□ -1.99
C9orf72Q96LT7 MIR4298-201ENST00000584380 73 ntBASIC2.6□□□□□ -1.99
C9orf72Q96LT7 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.6□□□□□ -1.99
C9orf72Q96LT7 SNHG22-203ENST00000617833 660 ntBASIC2.6□□□□□ -1.99
C9orf72Q96LT7 AC092608.2-201ENST00000624427 218 ntBASIC2.6□□□□□ -1.99
C9orf72Q96LT7 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.6□□□□□ -1.99
C9orf72Q96LT7 AC110079.1-202ENST00000635213 138 ntBASIC2.6□□□□□ -1.99
C9orf72Q96LT7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
C9orf72Q96LT7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
C9orf72Q96LT7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.6□□□□□ -1.99
C9orf72Q96LT7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.6□□□□□ -1.99
C9orf72Q96LT7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.6□□□□□ -1.99
C9orf72Q96LT7 AP000526.1-201ENST00000603308 1388 ntBASIC2.6□□□□□ -1.99
C9orf72Q96LT7 AL512283.1-201ENST00000606756 1384 ntBASIC2.6□□□□□ -1.99
C9orf72Q96LT7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
C9orf72Q96LT7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
C9orf72Q96LT7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.59□□□□□ -1.99
C9orf72Q96LT7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.59□□□□□ -1.99
C9orf72Q96LT7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
C9orf72Q96LT7 AL162578.1-201ENST00000406202 378 ntBASIC2.59□□□□□ -1.99
C9orf72Q96LT7 RNU2-43P-201ENST00000410306 190 ntBASIC2.59□□□□□ -1.99
C9orf72Q96LT7 AC080125.1-201ENST00000414888 684 ntBASIC2.59□□□□□ -1.99
C9orf72Q96LT7 THAP5P1-201ENST00000439089 262 ntBASIC2.59□□□□□ -1.99
C9orf72Q96LT7 RPS12P2-201ENST00000439728 269 ntBASIC2.59□□□□□ -1.99
C9orf72Q96LT7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.59□□□□□ -1.99
C9orf72Q96LT7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.59□□□□□ -1.99
C9orf72Q96LT7 AC234775.1-201ENST00000454247 670 ntBASIC2.59□□□□□ -1.99
C9orf72Q96LT7 AC027673.1-201ENST00000456245 405 ntBASIC2.59□□□□□ -1.99
C9orf72Q96LT7 AC126389.1-201ENST00000477436 290 ntBASIC2.59□□□□□ -1.99
C9orf72Q96LT7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.59□□□□□ -1.99
C9orf72Q96LT7 AC147055.4-201ENST00000504399 745 ntBASIC2.59□□□□□ -1.99
C9orf72Q96LT7 AC113420.1-201ENST00000507903 571 ntBASIC2.59□□□□□ -1.99
C9orf72Q96LT7 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.59□□□□□ -1.99
C9orf72Q96LT7 AC114781.4-201ENST00000513707 639 ntBASIC2.59□□□□□ -1.99
C9orf72Q96LT7 AC096725.1-201ENST00000514266 313 ntBASIC2.59□□□□□ -1.99
C9orf72Q96LT7 RNU4-29P-201ENST00000515943 174 ntBASIC2.59□□□□□ -1.99
C9orf72Q96LT7 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.59□□□□□ -1.99
C9orf72Q96LT7 AP003049.1-201ENST00000529418 457 ntBASIC2.59□□□□□ -1.99
C9orf72Q96LT7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
C9orf72Q96LT7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.59□□□□□ -1.99
C9orf72Q96LT7 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
C9orf72Q96LT7 AC008739.2-201ENST00000597006 317 ntBASIC2.59□□□□□ -1.99
C9orf72Q96LT7 TUG1_1.1-201ENST00000610654 145 ntBASIC2.59□□□□□ -1.99
C9orf72Q96LT7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
C9orf72Q96LT7 AC090772.4-201ENST00000623599 362 ntBASIC2.59□□□□□ -1.99
C9orf72Q96LT7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.59□□□□□ -1.99
C9orf72Q96LT7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
C9orf72Q96LT7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.59□□□□□ -2
C9orf72Q96LT7 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.59□□□□□ -2
C9orf72Q96LT7 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.59□□□□□ -2
C9orf72Q96LT7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
C9orf72Q96LT7 AC087359.1-201ENST00000508335 1740 ntBASIC2.59□□□□□ -2
C9orf72Q96LT7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
C9orf72Q96LT7 U8.8-201ENST00000365399 135 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 SNRPEP2-201ENST00000397592 279 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 AL356057.2-201ENST00000403318 432 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 RNU2-25P-201ENST00000411041 191 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 AL512637.2-201ENST00000431287 1256 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.58□□□□□ -2
C9orf72Q96LT7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.58□□□□□ -2
C9orf72Q96LT7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.58□□□□□ -2
C9orf72Q96LT7 AC023424.2-201ENST00000493479 777 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.58□□□□□ -2
C9orf72Q96LT7 AC109464.2-201ENST00000510242 943 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.58□□□□□ -2
C9orf72Q96LT7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.58□□□□□ -2
C9orf72Q96LT7 SNORA31.15-201ENST00000516771 132 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.58□□□□□ -2
C9orf72Q96LT7 AP001189.2-201ENST00000527320 189 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.58□□□□□ -2
C9orf72Q96LT7 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.58□□□□□ -2
C9orf72Q96LT7 AC027807.1-201ENST00000559921 996 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 AC105224.1-201ENST00000587055 421 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 AL035411.2-201ENST00000604022 421 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 AC026790.2-201ENST00000606282 430 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 AL137847.3-201ENST00000611521 109 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 DUXAP10-204ENST00000612052 616 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 AL161629.2-201ENST00000615347 275 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 AC093875.1-201ENST00000623688 504 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 AC010872.1-201ENST00000624225 675 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 FO624990.1-201ENST00000636373 85 ntBASIC2.58□□□□□ -2
C9orf72Q96LT7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
C9orf72Q96LT7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
C9orf72Q96LT7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
C9orf72Q96LT7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.58□□□□□ -2
C9orf72Q96LT7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
C9orf72Q96LT7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
C9orf72Q96LT7 AC012321.1-201ENST00000561622 1588 ntBASIC2.57□□□□□ -2
C9orf72Q96LT7 TPTE2P4-201ENST00000258589 1605 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms