Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.65□□□□□ -1.51
CALR3Q96L12 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.64□□□□□ -1.51
CALR3Q96L12 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CALR3Q96L12 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CALR3Q96L12 NEAT1-202ENST00000501122 22743 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CALR3Q96L12 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.64□□□□□ -1.51
CALR3Q96L12 Y_RNA.527-201ENST00000384573 102 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CALR3Q96L12 HSPA8P15-201ENST00000401676 786 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 EI24P1-201ENST00000416584 867 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 AC243428.1-201ENST00000421099 264 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.64□□□□□ -1.51
CALR3Q96L12 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.64□□□□□ -1.51
CALR3Q96L12 AL356867.1-201ENST00000429623 299 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 MTCYBP9-201ENST00000431021 303 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 FTH1P25-201ENST00000447665 469 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 HMGB3P30-201ENST00000457863 606 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 AC128713.1-201ENST00000471495 306 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.64□□□□□ -1.51
CALR3Q96L12 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.64□□□□□ -1.51
CALR3Q96L12 AC116655.1-201ENST00000508324 901 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 MTCO2P24-201ENST00000515611 426 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 RNU1-86P-201ENST00000516108 154 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 RNU1-107P-201ENST00000516617 154 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CALR3Q96L12 AC084851.1-201ENST00000529105 249 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 AC009643.1-201ENST00000532030 391 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.64□□□□□ -1.51
CALR3Q96L12 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.64□□□□□ -1.51
CALR3Q96L12 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.64□□□□□ -1.51
CALR3Q96L12 AL049872.1-201ENST00000556323 322 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 AC109446.1-201ENST00000566172 220 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.64□□□□□ -1.51
CALR3Q96L12 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.64□□□□□ -1.51
CALR3Q96L12 MIR4503-201ENST00000582187 83 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.64□□□□□ -1.51
CALR3Q96L12 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CALR3Q96L12 AL160281.1-201ENST00000605307 311 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 AP002826.1-201ENST00000608835 315 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 AL591516.1-201ENST00000611326 274 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 AL355810.1-201ENST00000614629 552 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 AC067931.1-201ENST00000624190 671 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.64□□□□□ -1.51
CALR3Q96L12 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CALR3Q96L12 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CALR3Q96L12 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
CALR3Q96L12 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CALR3Q96L12 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CALR3Q96L12 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.63□□□□□ -1.51
CALR3Q96L12 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.63□□□□□ -1.51
CALR3Q96L12 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CALR3Q96L12 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CALR3Q96L12 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CALR3Q96L12 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CALR3Q96L12 MIR568-201ENST00000385036 95 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CALR3Q96L12 RNU6-1025P-201ENST00000410629 104 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.63□□□□□ -1.51
CALR3Q96L12 AL158156.1-201ENST00000422509 473 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.63□□□□□ -1.51
CALR3Q96L12 NDUFB4P7-201ENST00000423198 363 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 SRSF1P1-201ENST00000424058 520 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.63□□□□□ -1.51
CALR3Q96L12 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CALR3Q96L12 AC009238.2-201ENST00000431026 355 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 USP9YP7-201ENST00000436723 430 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 RPS11P7-201ENST00000442125 465 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.63□□□□□ -1.51
CALR3Q96L12 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.63□□□□□ -1.51
CALR3Q96L12 USP9YP32-201ENST00000452432 430 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 snoU13.4-201ENST00000458916 104 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 AC008571.1-201ENST00000467232 300 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 AL160314.1-201ENST00000490836 438 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.63□□□□□ -1.51
CALR3Q96L12 RNU6-120P-201ENST00000516077 103 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 RNU6-1256P-201ENST00000516539 103 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.63□□□□□ -1.51
CALR3Q96L12 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CALR3Q96L12 GNAI2P1-201ENST00000541815 315 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 OR8R1P-201ENST00000543943 764 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.63□□□□□ -1.51
CALR3Q96L12 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.63□□□□□ -1.51
CALR3Q96L12 AC008269.2-201ENST00000561915 1105 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.63□□□□□ -1.51
CALR3Q96L12 AC006006.1-201ENST00000603082 144 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 BX005214.3-202ENST00000619809 325 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.63□□□□□ -1.51
CALR3Q96L12 CU639417.4-201ENST00000623928 207 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CALR3Q96L12 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CALR3Q96L12 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CALR3Q96L12 AL592182.3-201ENST00000642132 3304 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
CALR3Q96L12 AC063976.2-201ENST00000425667 3556 ntBASIC5.63□□□□□ -1.51
CALR3Q96L12 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CALR3Q96L12 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CALR3Q96L12 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.63□□□□□ -1.51
CALR3Q96L12 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms