Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3□□□□□ -1.93
USP47Q96K76 ZNF720P1-201ENST00000562403 1939 ntBASIC3□□□□□ -1.93
USP47Q96K76 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
USP47Q96K76 RNU6-354P-201ENST00000383862 107 ntBASIC3□□□□□ -1.93
USP47Q96K76 RNU6-610P-201ENST00000384264 107 ntBASIC3□□□□□ -1.93
USP47Q96K76 AL139098.1-201ENST00000407291 389 ntBASIC3□□□□□ -1.93
USP47Q96K76 RNU4-65P-201ENST00000410473 140 ntBASIC3□□□□□ -1.93
USP47Q96K76 RNU6-712P-201ENST00000410558 100 ntBASIC3□□□□□ -1.93
USP47Q96K76 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3□□□□□ -1.93
USP47Q96K76 AL133384.1-201ENST00000412744 351 ntBASIC3□□□□□ -1.93
USP47Q96K76 Z98742.2-201ENST00000431564 187 ntBASIC3□□□□□ -1.93
USP47Q96K76 HIGD1AP11-201ENST00000438361 280 ntBASIC3□□□□□ -1.93
USP47Q96K76 RPL21P2-201ENST00000440049 481 ntBASIC3□□□□□ -1.93
USP47Q96K76 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3□□□□□ -1.93
USP47Q96K76 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3□□□□□ -1.93
USP47Q96K76 AC093767.1-201ENST00000504523 156 ntBASIC3□□□□□ -1.93
USP47Q96K76 AC116337.1-201ENST00000509680 687 ntBASIC3□□□□□ -1.93
USP47Q96K76 RNU6-885P-201ENST00000516607 104 ntBASIC3□□□□□ -1.93
USP47Q96K76 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3□□□□□ -1.93
USP47Q96K76 AL163153.1-201ENST00000554223 283 ntBASIC3□□□□□ -1.93
USP47Q96K76 AC005951.1-201ENST00000576706 485 ntBASIC3□□□□□ -1.93
USP47Q96K76 MIR4474-201ENST00000579189 78 ntBASIC3□□□□□ -1.93
USP47Q96K76 AP005229.2-201ENST00000609980 697 ntBASIC3□□□□□ -1.93
USP47Q96K76 AL390240.1-201ENST00000612950 384 ntBASIC3□□□□□ -1.93
USP47Q96K76 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3□□□□□ -1.93
USP47Q96K76 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3□□□□□ -1.93
USP47Q96K76 CU459211.1-201ENST00000635667 749 ntBASIC3□□□□□ -1.93
USP47Q96K76 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.99□□□□□ -1.93
USP47Q96K76 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.99□□□□□ -1.93
USP47Q96K76 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
USP47Q96K76 RNU6-251P-201ENST00000363235 104 ntBASIC2.99□□□□□ -1.93
USP47Q96K76 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
USP47Q96K76 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.99□□□□□ -1.93
USP47Q96K76 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.99□□□□□ -1.93
USP47Q96K76 GSTA9P-201ENST00000406231 611 ntBASIC2.99□□□□□ -1.93
USP47Q96K76 RN7SKP32-201ENST00000410167 303 ntBASIC2.99□□□□□ -1.93
USP47Q96K76 RNU6-575P-201ENST00000411326 105 ntBASIC2.99□□□□□ -1.93
USP47Q96K76 AC109780.2-201ENST00000413467 845 ntBASIC2.99□□□□□ -1.93
USP47Q96K76 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.99□□□□□ -1.93
USP47Q96K76 DPPA2P1-201ENST00000428060 556 ntBASIC2.99□□□□□ -1.93
USP47Q96K76 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.99□□□□□ -1.93
USP47Q96K76 SDR42E1P3-201ENST00000438345 502 ntBASIC2.99□□□□□ -1.93
USP47Q96K76 RPL23AP42-201ENST00000471152 471 ntBASIC2.99□□□□□ -1.93
USP47Q96K76 CKS1BP2-201ENST00000497342 240 ntBASIC2.99□□□□□ -1.93
USP47Q96K76 MTCO2P9-201ENST00000503214 694 ntBASIC2.99□□□□□ -1.93
USP47Q96K76 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.99□□□□□ -1.93
USP47Q96K76 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.99□□□□□ -1.93
USP47Q96K76 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
USP47Q96K76 TTC39CP1-201ENST00000512513 755 ntBASIC2.99□□□□□ -1.93
USP47Q96K76 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.99□□□□□ -1.93
USP47Q96K76 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.99□□□□□ -1.93
USP47Q96K76 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.99□□□□□ -1.93
USP47Q96K76 AC092474.3-201ENST00000603022 568 ntBASIC2.99□□□□□ -1.93
USP47Q96K76 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.99□□□□□ -1.93
USP47Q96K76 AL110115.1-201ENST00000614396 364 ntBASIC2.99□□□□□ -1.93
USP47Q96K76 AL355810.1-201ENST00000614629 552 ntBASIC2.99□□□□□ -1.93
USP47Q96K76 AC095031.1-201ENST00000623685 672 ntBASIC2.99□□□□□ -1.93
USP47Q96K76 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.99□□□□□ -1.93
USP47Q96K76 OR4G2P-202ENST00000641004 1759 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.98□□□□□ -1.93
USP47Q96K76 AC010733.2-201ENST00000589496 5702 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.98□□□□□ -1.93
USP47Q96K76 RNU6-549P-201ENST00000384433 107 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 TMSB4XP8-201ENST00000402089 135 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 SNORA11.4-201ENST00000408823 129 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.98□□□□□ -1.93
USP47Q96K76 TMSB4XP6-201ENST00000415187 135 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 AC005005.2-201ENST00000420779 380 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 TMSB4XP1-201ENST00000424567 135 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 AC079780.1-201ENST00000428259 207 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 FO393414.1-201ENST00000428697 1184 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.98□□□□□ -1.93
USP47Q96K76 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.98□□□□□ -1.93
USP47Q96K76 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.98□□□□□ -1.93
USP47Q96K76 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.98□□□□□ -1.93
USP47Q96K76 AL445669.2-201ENST00000454425 421 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 AC104308.1-201ENST00000454621 333 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 RPS23P3-201ENST00000470993 430 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.98□□□□□ -1.93
USP47Q96K76 AC096751.1-202ENST00000502691 1067 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 GZMAP1-201ENST00000503054 631 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.98□□□□□ -1.93
USP47Q96K76 MTND5P4-201ENST00000514978 288 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 RNA5SP135-201ENST00000517019 125 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
USP47Q96K76 AC093519.1-201ENST00000566109 298 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.98□□□□□ -1.93
USP47Q96K76 AP001029.3-201ENST00000588063 596 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.98□□□□□ -1.93
USP47Q96K76 AC012669.1-201ENST00000603209 283 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
USP47Q96K76 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.98□□□□□ -1.93
USP47Q96K76 AC009318.4-201ENST00000620496 486 ntBASIC2.98□□□□□ -1.93
USP47Q96K76 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.98□□□□□ -1.93
USP47Q96K76 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
USP47Q96K76 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.97□□□□□ -1.93
USP47Q96K76 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
USP47Q96K76 AL136164.4-201ENST00000625013 2135 ntBASIC2.97□□□□□ -1.93
USP47Q96K76 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
USP47Q96K76 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms