Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 SNRPEP4-201ENST00000435815 279 ntBASIC4.52□□□□□ -1.69
CCDC136Q96JN2 MTATP6P26-201ENST00000445926 662 ntBASIC4.52□□□□□ -1.69
CCDC136Q96JN2 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC136Q96JN2 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC136Q96JN2 RPL7P5-201ENST00000471472 736 ntBASIC4.52□□□□□ -1.69
CCDC136Q96JN2 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC136Q96JN2 AP000857.1-201ENST00000532151 543 ntBASIC4.52□□□□□ -1.69
CCDC136Q96JN2 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC136Q96JN2 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC136Q96JN2 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC136Q96JN2 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC136Q96JN2 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC136Q96JN2 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC136Q96JN2 AC110760.3-201ENST00000598794 467 ntBASIC4.52□□□□□ -1.69
CCDC136Q96JN2 VN1R85P-201ENST00000601587 426 ntBASIC4.52□□□□□ -1.69
CCDC136Q96JN2 AC004908.2-201ENST00000609090 574 ntBASIC4.52□□□□□ -1.69
CCDC136Q96JN2 TUG1_2.1-201ENST00000614234 87 ntBASIC4.52□□□□□ -1.69
CCDC136Q96JN2 AC004696.1-201ENST00000614345 607 ntBASIC4.52□□□□□ -1.69
CCDC136Q96JN2 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.52□□□□□ -1.69
CCDC136Q96JN2 AC009159.1-201ENST00000618386 642 ntBASIC4.52□□□□□ -1.69
CCDC136Q96JN2 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
CCDC136Q96JN2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC136Q96JN2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC136Q96JN2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC136Q96JN2 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC136Q96JN2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC136Q96JN2 OR4G2P-202ENST00000641004 1759 ntBASIC4.51□□□□□ -1.69
CCDC136Q96JN2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC136Q96JN2 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC136Q96JN2 RNA5SP31-201ENST00000411144 127 ntBASIC4.51□□□□□ -1.69
CCDC136Q96JN2 AC245054.1-201ENST00000420944 258 ntBASIC4.51□□□□□ -1.69
CCDC136Q96JN2 AL139247.1-201ENST00000422768 325 ntBASIC4.51□□□□□ -1.69
CCDC136Q96JN2 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC136Q96JN2 OR2B8P-201ENST00000432841 938 ntBASIC4.51□□□□□ -1.69
CCDC136Q96JN2 RPL35AP22-201ENST00000436855 335 ntBASIC4.51□□□□□ -1.69
CCDC136Q96JN2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC136Q96JN2 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC136Q96JN2 AC112204.1-201ENST00000502591 103 ntBASIC4.51□□□□□ -1.69
CCDC136Q96JN2 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC136Q96JN2 AC010460.1-201ENST00000507087 466 ntBASIC4.51□□□□□ -1.69
CCDC136Q96JN2 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC136Q96JN2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.51□□□□□ -1.69
CCDC136Q96JN2 RNU6-840P-201ENST00000517275 65 ntBASIC4.51□□□□□ -1.69
CCDC136Q96JN2 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC136Q96JN2 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
CCDC136Q96JN2 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC136Q96JN2 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC136Q96JN2 OR4H12P-201ENST00000556269 907 ntBASIC4.51□□□□□ -1.69
CCDC136Q96JN2 AC012414.6-201ENST00000568241 401 ntBASIC4.51□□□□□ -1.69
CCDC136Q96JN2 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC136Q96JN2 AL590229.1-201ENST00000603497 542 ntBASIC4.51□□□□□ -1.69
CCDC136Q96JN2 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC136Q96JN2 AC239868.4-201ENST00000608318 671 ntBASIC4.51□□□□□ -1.69
CCDC136Q96JN2 AC073114.1-201ENST00000612027 490 ntBASIC4.51□□□□□ -1.69
CCDC136Q96JN2 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC136Q96JN2 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC136Q96JN2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CCDC136Q96JN2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC136Q96JN2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC136Q96JN2 SAR1AP2-201ENST00000392696 594 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 RN7SKP159-201ENST00000410657 292 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 HMGN1P24-201ENST00000412282 298 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 RPL27AP8-201ENST00000424277 446 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AL591419.1-201ENST00000427423 339 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 RPL21P40-201ENST00000428586 483 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AC092641.1-201ENST00000440229 772 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AL049714.1-201ENST00000466686 347 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 HMGN2P13-201ENST00000476476 274 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AL359273.1-201ENST00000510918 627 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.5□□□□□ -1.69
CCDC136Q96JN2 SNORA70.19-201ENST00000516717 90 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AC022616.6-201ENST00000520479 119 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 HMGN1P28-201ENST00000521340 364 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AP001804.3-201ENST00000525146 880 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AL356057.1-201ENST00000533798 831 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AP005205.1-201ENST00000563503 508 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC136Q96JN2 MIR4286-201ENST00000580651 93 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AC053481.4-201ENST00000583164 216 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AC010620.1-201ENST00000601088 1102 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC136Q96JN2 RNU1-30P-201ENST00000606575 163 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AP000254.1-201ENST00000609934 520 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 AL136313.1-201ENST00000624804 202 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC136Q96JN2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC136Q96JN2 MTND4P4-201ENST00000439033 1366 ntBASIC4.5□□□□□ -1.69
CCDC136Q96JN2 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC136Q96JN2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC136Q96JN2 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms