Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL355073.2-201ENST00000612106 557 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS50Q96JG6 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS50Q96JG6 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS50Q96JG6 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS50Q96JG6 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS50Q96JG6 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS50Q96JG6 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 NCAPGP1-201ENST00000505112 1814 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 AC004520.1-201ENST00000608362 1413 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VPS50Q96JG6 AP001486.2-201ENST00000561652 5113 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
VPS50Q96JG6 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS50Q96JG6 SPRR2C-201ENST00000290702 219 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 RNU5A-8P-201ENST00000364102 114 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 SNORA7.2-201ENST00000364446 145 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 RNU6-1078P-201ENST00000364522 103 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 RNY3P14-201ENST00000384309 102 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 MIR607-201ENST00000385241 96 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 HSPE1P26-201ENST00000405341 275 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 RNU6-712P-201ENST00000410558 100 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 HMGB3P20-201ENST00000417997 600 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 ELOCP4-201ENST00000420090 333 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
VPS50Q96JG6 DPPA2P1-201ENST00000428060 556 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS50Q96JG6 RPL23AP30-201ENST00000432419 501 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 ATP5HP2-201ENST00000433885 485 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.97□□□□□ -1.77
VPS50Q96JG6 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.97□□□□□ -1.77
VPS50Q96JG6 AL136380.1-201ENST00000447970 162 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 AL162151.2-201ENST00000448875 158 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 AC010655.1-201ENST00000449336 292 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 NANOGP10-201ENST00000453325 895 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 UBDP1-202ENST00000457888 382 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 RPL7L1P8-201ENST00000469911 741 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 AL132838.2-201ENST00000492041 314 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 FTH1P21-201ENST00000512179 511 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 AC114797.1-201ENST00000514003 728 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 RNA5SP519-201ENST00000516480 119 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS50Q96JG6 TRAV8-5-201ENST00000537369 341 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.97□□□□□ -1.77
VPS50Q96JG6 AC006064.5-201ENST00000541782 248 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.97□□□□□ -1.77
VPS50Q96JG6 HMGB1P33-201ENST00000563485 527 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 ZNF192P1-203ENST00000565888 810 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.97□□□□□ -1.77
VPS50Q96JG6 COX6CP3-201ENST00000580869 223 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 AL161729.3-201ENST00000603533 673 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 AL031176.1-201ENST00000604554 466 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 AL158211.4-201ENST00000606988 584 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VPS50Q96JG6 uc_338.12-201ENST00000616344 181 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VPS50Q96JG6 AC007546.1-201ENST00000619452 559 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 AC139792.3-201ENST00000623525 224 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 AC034229.5-201ENST00000624258 185 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 AC048347.1-201ENST00000624621 427 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 AL136313.1-201ENST00000624804 202 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 PRO1804-201ENST00000623780 2050 ntBASIC3.97□□□□□ -1.77
VPS50Q96JG6 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VPS50Q96JG6 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
VPS50Q96JG6 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
VPS50Q96JG6 FAM91A3P-201ENST00000456826 2544 ntBASIC3.96□□□□□ -1.77
VPS50Q96JG6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
VPS50Q96JG6 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS50Q96JG6 SNORA60-201ENST00000362396 134 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 Y_RNA.453-201ENST00000384223 109 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 RNU6-456P-201ENST00000384493 107 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 MIR135A2-201ENST00000384854 100 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 USP9YP6-201ENST00000413550 854 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 AL139095.3-201ENST00000419672 1203 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
VPS50Q96JG6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS50Q96JG6 AL662791.1-201ENST00000441992 928 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 MTATP6P30-201ENST00000443540 664 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 NFU1P2-201ENST00000448700 469 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS50Q96JG6 MTND2P24-201ENST00000453434 806 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
VPS50Q96JG6 RPS29P19-201ENST00000479709 171 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 RPL31P13-201ENST00000484151 370 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 AC023194.1-201ENST00000493084 308 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 AC069439.1-201ENST00000494739 167 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS50Q96JG6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS50Q96JG6 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS50Q96JG6 SCARNA24.1-201ENST00000516465 137 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 RNU6-1178P-201ENST00000516674 107 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 IGKV2-23-201ENST00000518729 323 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 AC090572.1-201ENST00000519251 160 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms