Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RPS3AP50-201ENST00000487064 803 ntBASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 AC007182.2-201ENST00000489251 402 ntBASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 AC020893.1-201ENST00000502452 580 ntBASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 RNA5SP337-201ENST00000517007 109 ntBASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 AC018630.1-201ENST00000541376 925 ntBASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 AL133153.1-201ENST00000557756 303 ntBASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 XIAPP1-201ENST00000603162 600 ntBASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 AC006338.1-201ENST00000618453 749 ntBASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 MFSD8-236ENST00000641509 4050 ntBASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM43Q96BQ3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 RNA5SP50-201ENST00000363731 107 ntBASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 RNU4-1-201ENST00000363925 141 ntBASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 MIR135A2-201ENST00000384854 100 ntBASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 RNA5SP120-201ENST00000410900 112 ntBASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 AC021146.1-201ENST00000511202 716 ntBASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 AC021146.3-201ENST00000511911 260 ntBASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 RN7SKP289-201ENST00000517244 295 ntBASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 AC011979.2-201ENST00000527568 352 ntBASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 AF250324.2-201ENST00000608299 610 ntBASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 MIR6852-201ENST00000621699 66 ntBASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 MARK2P15-201ENST00000432204 2186 ntBASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 AL365440.1-201ENST00000436135 2167 ntBASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
TRIM43Q96BQ3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 OR1S2-201ENST00000302592 978 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 RNU6-223P-201ENST00000362830 107 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 RNU6-181P-201ENST00000363225 107 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 RNU6-335P-201ENST00000364563 113 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 MIR199A2-201ENST00000385289 110 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 SOD2P1-201ENST00000396543 562 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 RNU4-65P-201ENST00000410473 140 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 RAC1P3-201ENST00000416129 580 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 AC007283.2-201ENST00000424739 197 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 AC002486.1-201ENST00000435098 391 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 AC012158.1-204ENST00000483430 465 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 RN7SL271P-201ENST00000487601 295 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 AC023194.1-201ENST00000493084 308 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 AC135721.1-201ENST00000497954 479 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 RNU6-445P-201ENST00000516949 107 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 AC090136.1-201ENST00000520009 240 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 DEFB108D-201ENST00000527787 222 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 AC135001.1-201ENST00000544546 283 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 AC069240.1-201ENST00000548774 375 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 AC010591.1-201ENST00000603941 649 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 RBM11P1-201ENST00000604951 799 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 AL590282.1-201ENST00000610379 1136 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 AL603758.1-201ENST00000618654 241 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 MIR6130-201ENST00000619419 109 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 AC019226.1-201ENST00000625666 515 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.17□□□□□ -1.74
TRIM43Q96BQ3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms