Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 VN1R96P-201ENST00000446052 858 ntBASIC1.5□□□□□ -2.17
TTC28Q96AY4 AC004223.1-201ENST00000479840 271 ntBASIC1.5□□□□□ -2.17
TTC28Q96AY4 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.5□□□□□ -2.17
TTC28Q96AY4 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.5□□□□□ -2.17
TTC28Q96AY4 MTND2P17-201ENST00000550281 688 ntBASIC1.5□□□□□ -2.17
TTC28Q96AY4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.5□□□□□ -2.17
TTC28Q96AY4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.5□□□□□ -2.17
TTC28Q96AY4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
TTC28Q96AY4 RNA5SP239-201ENST00000410218 129 ntBASIC1.49□□□□□ -2.17
TTC28Q96AY4 TRAPPC2P10-201ENST00000415662 323 ntBASIC1.49□□□□□ -2.17
TTC28Q96AY4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.49□□□□□ -2.17
TTC28Q96AY4 AL357520.1-201ENST00000441557 453 ntBASIC1.49□□□□□ -2.17
TTC28Q96AY4 SNORA70.14-201ENST00000516205 110 ntBASIC1.49□□□□□ -2.17
TTC28Q96AY4 SNORA31.11-201ENST00000516528 139 ntBASIC1.49□□□□□ -2.17
TTC28Q96AY4 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.49□□□□□ -2.17
TTC28Q96AY4 AC002546.1-201ENST00000588041 2504 ntBASIC1.49□□□□□ -2.17
TTC28Q96AY4 AC005336.3-201ENST00000623833 2679 ntBASIC1.49□□□□□ -2.17
TTC28Q96AY4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
TTC28Q96AY4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC1.49□□□□□ -2.17
TTC28Q96AY4 NDUFB4P5-201ENST00000415445 361 ntBASIC1.49□□□□□ -2.17
TTC28Q96AY4 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.49□□□□□ -2.17
TTC28Q96AY4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.49□□□□□ -2.17
TTC28Q96AY4 RPS15AP1-201ENST00000457423 391 ntBASIC1.49□□□□□ -2.17
TTC28Q96AY4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.49□□□□□ -2.17
TTC28Q96AY4 AP000926.1-201ENST00000479573 241 ntBASIC1.49□□□□□ -2.17
TTC28Q96AY4 AL049830.2-201ENST00000480072 201 ntBASIC1.49□□□□□ -2.17
TTC28Q96AY4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.49□□□□□ -2.17
TTC28Q96AY4 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC1.49□□□□□ -2.17
TTC28Q96AY4 USP9YP5-201ENST00000511770 630 ntBASIC1.49□□□□□ -2.17
TTC28Q96AY4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC1.49□□□□□ -2.17
TTC28Q96AY4 AC087373.1-201ENST00000524920 491 ntBASIC1.49□□□□□ -2.17
TTC28Q96AY4 TRAV28-201ENST00000557548 323 ntBASIC1.49□□□□□ -2.17
TTC28Q96AY4 AC090953.1-201ENST00000604305 1092 ntBASIC1.49□□□□□ -2.17
TTC28Q96AY4 AC009452.1-201ENST00000640823 606 ntBASIC1.49□□□□□ -2.17
TTC28Q96AY4 Y_RNA.258-201ENST00000364613 105 ntBASIC1.48□□□□□ -2.17
TTC28Q96AY4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.48□□□□□ -2.17
TTC28Q96AY4 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
TTC28Q96AY4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.48□□□□□ -2.17
TTC28Q96AY4 TRBV8-1-201ENST00000481590 279 ntBASIC1.48□□□□□ -2.17
TTC28Q96AY4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TTC28Q96AY4 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC1.48□□□□□ -2.17
TTC28Q96AY4 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.48□□□□□ -2.17
TTC28Q96AY4 AC092954.1-201ENST00000609121 445 ntBASIC1.48□□□□□ -2.17
TTC28Q96AY4 FO624990.1-201ENST00000636373 85 ntBASIC1.48□□□□□ -2.17
TTC28Q96AY4 RLIMP2-201ENST00000427891 1563 ntBASIC1.48□□□□□ -2.17
TTC28Q96AY4 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
TTC28Q96AY4 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.48□□□□□ -2.17
TTC28Q96AY4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.48□□□□□ -2.17
TTC28Q96AY4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.48□□□□□ -2.17
TTC28Q96AY4 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC1.48□□□□□ -2.17
TTC28Q96AY4 RNU6-1132P-201ENST00000459214 107 ntBASIC1.48□□□□□ -2.17
TTC28Q96AY4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.48□□□□□ -2.17
TTC28Q96AY4 RNA5SP330-201ENST00000517096 96 ntBASIC1.48□□□□□ -2.17
TTC28Q96AY4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.48□□□□□ -2.17
TTC28Q96AY4 AC093331.1-201ENST00000521474 169 ntBASIC1.48□□□□□ -2.17
TTC28Q96AY4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.48□□□□□ -2.17
TTC28Q96AY4 MIR4419B-201ENST00000577260 68 ntBASIC1.48□□□□□ -2.17
TTC28Q96AY4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TTC28Q96AY4 RNU4-91P-201ENST00000364778 135 ntBASIC1.47□□□□□ -2.17
TTC28Q96AY4 RNA5SP338-201ENST00000410495 85 ntBASIC1.47□□□□□ -2.17
TTC28Q96AY4 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC1.47□□□□□ -2.17
TTC28Q96AY4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.47□□□□□ -2.17
TTC28Q96AY4 NDUFS5P3-201ENST00000450668 321 ntBASIC1.47□□□□□ -2.17
TTC28Q96AY4 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.47□□□□□ -2.17
TTC28Q96AY4 AC090255.1-201ENST00000495779 349 ntBASIC1.47□□□□□ -2.17
TTC28Q96AY4 AL135786.2-201ENST00000608422 615 ntBASIC1.47□□□□□ -2.17
TTC28Q96AY4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.47□□□□□ -2.17
TTC28Q96AY4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.47□□□□□ -2.17
TTC28Q96AY4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.47□□□□□ -2.17
TTC28Q96AY4 HSPE1P22-201ENST00000456856 327 ntBASIC1.47□□□□□ -2.17
TTC28Q96AY4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.47□□□□□ -2.17
TTC28Q96AY4 AC008837.2-201ENST00000513076 418 ntBASIC1.47□□□□□ -2.17
TTC28Q96AY4 AC000123.2-201ENST00000623124 461 ntBASIC1.47□□□□□ -2.17
TTC28Q96AY4 AC067852.7-201ENST00000623270 535 ntBASIC1.47□□□□□ -2.17
TTC28Q96AY4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
TTC28Q96AY4 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.47□□□□□ -2.17
TTC28Q96AY4 MTCO1P14-201ENST00000441695 1559 ntBASIC1.46□□□□□ -2.18
TTC28Q96AY4 MCTS2P-201ENST00000394552 546 ntBASIC1.46□□□□□ -2.18
TTC28Q96AY4 HMGN2P19-201ENST00000425149 265 ntBASIC1.46□□□□□ -2.18
TTC28Q96AY4 SEC63P1-201ENST00000425785 1258 ntBASIC1.46□□□□□ -2.18
TTC28Q96AY4 SAR1AP4-201ENST00000429225 591 ntBASIC1.46□□□□□ -2.18
TTC28Q96AY4 AL021397.1-201ENST00000451806 248 ntBASIC1.46□□□□□ -2.18
TTC28Q96AY4 RNU6-113P-201ENST00000516653 101 ntBASIC1.46□□□□□ -2.18
TTC28Q96AY4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC1.46□□□□□ -2.18
TTC28Q96AY4 AC012493.3-201ENST00000604494 112 ntBASIC1.46□□□□□ -2.18
TTC28Q96AY4 AC067838.1-201ENST00000606064 577 ntBASIC1.46□□□□□ -2.18
TTC28Q96AY4 MIR6715B-201ENST00000637172 77 ntBASIC1.46□□□□□ -2.18
TTC28Q96AY4 AC011155.1-201ENST00000316512 456 ntBASIC1.46□□□□□ -2.18
TTC28Q96AY4 RPL19P1-201ENST00000411635 428 ntBASIC1.46□□□□□ -2.18
TTC28Q96AY4 AC098592.2-201ENST00000413158 265 ntBASIC1.46□□□□□ -2.18
TTC28Q96AY4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.46□□□□□ -2.18
TTC28Q96AY4 AC099336.2-201ENST00000422457 254 ntBASIC1.46□□□□□ -2.18
TTC28Q96AY4 AL591212.2-201ENST00000433923 257 ntBASIC1.46□□□□□ -2.18
TTC28Q96AY4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.46□□□□□ -2.18
TTC28Q96AY4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.46□□□□□ -2.18
TTC28Q96AY4 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC1.46□□□□□ -2.18
TTC28Q96AY4 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.46□□□□□ -2.18
TTC28Q96AY4 AC006254.3-201ENST00000603353 884 ntBASIC1.46□□□□□ -2.18
TTC28Q96AY4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TTC28Q96AY4 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms