Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 MIR548Y-201ENST00000582739 110 ntBASIC2.63□□□□□ -1.99
TOPBP1Q92547 AC069304.3-201ENST00000603938 1084 ntBASIC2.63□□□□□ -1.99
TOPBP1Q92547 RNA5SP108-201ENST00000605921 117 ntBASIC2.63□□□□□ -1.99
TOPBP1Q92547 OR4G1P-203ENST00000641984 1631 ntBASIC2.62□□□□□ -1.99
TOPBP1Q92547 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
TOPBP1Q92547 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TOPBP1Q92547 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TOPBP1Q92547 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TOPBP1Q92547 RNU6-386P-201ENST00000362650 107 ntBASIC2.62□□□□□ -1.99
TOPBP1Q92547 SNORA67.6-201ENST00000391093 99 ntBASIC2.62□□□□□ -1.99
TOPBP1Q92547 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.62□□□□□ -1.99
TOPBP1Q92547 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.62□□□□□ -1.99
TOPBP1Q92547 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.62□□□□□ -1.99
TOPBP1Q92547 HMGN2P21-201ENST00000447764 270 ntBASIC2.62□□□□□ -1.99
TOPBP1Q92547 TPT1P14-201ENST00000448018 505 ntBASIC2.62□□□□□ -1.99
TOPBP1Q92547 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.62□□□□□ -1.99
TOPBP1Q92547 C1DP3-201ENST00000455013 423 ntBASIC2.62□□□□□ -1.99
TOPBP1Q92547 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.62□□□□□ -1.99
TOPBP1Q92547 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.62□□□□□ -1.99
TOPBP1Q92547 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.62□□□□□ -1.99
TOPBP1Q92547 SNORA31.15-201ENST00000516771 132 ntBASIC2.62□□□□□ -1.99
TOPBP1Q92547 RNU4-60P-201ENST00000517239 135 ntBASIC2.62□□□□□ -1.99
TOPBP1Q92547 AC067904.2-201ENST00000517322 1283 ntBASIC2.62□□□□□ -1.99
TOPBP1Q92547 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.62□□□□□ -1.99
TOPBP1Q92547 AC010735.1-201ENST00000567305 1026 ntBASIC2.62□□□□□ -1.99
TOPBP1Q92547 AC117490.2-201ENST00000610042 594 ntBASIC2.62□□□□□ -1.99
TOPBP1Q92547 AC022709.1-201ENST00000615967 87 ntBASIC2.62□□□□□ -1.99
TOPBP1Q92547 ZNF33CP-201ENST00000432492 2030 ntBASIC2.62□□□□□ -1.99
TOPBP1Q92547 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
TOPBP1Q92547 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
TOPBP1Q92547 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TOPBP1Q92547 SNORA31-201ENST00000362607 130 ntBASIC2.61□□□□□ -1.99
TOPBP1Q92547 AC004022.2-201ENST00000413824 193 ntBASIC2.61□□□□□ -1.99
TOPBP1Q92547 NDUFA5P10-201ENST00000432147 357 ntBASIC2.61□□□□□ -1.99
TOPBP1Q92547 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.61□□□□□ -1.99
TOPBP1Q92547 AC107398.1-201ENST00000486904 505 ntBASIC2.61□□□□□ -1.99
TOPBP1Q92547 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.61□□□□□ -1.99
TOPBP1Q92547 AC135721.1-201ENST00000497954 479 ntBASIC2.61□□□□□ -1.99
TOPBP1Q92547 AC078918.1-201ENST00000498515 228 ntBASIC2.61□□□□□ -1.99
TOPBP1Q92547 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TOPBP1Q92547 MTND4LP22-201ENST00000508209 276 ntBASIC2.61□□□□□ -1.99
TOPBP1Q92547 SNORA31.24-201ENST00000517232 57 ntBASIC2.61□□□□□ -1.99
TOPBP1Q92547 AC084851.1-201ENST00000529105 249 ntBASIC2.61□□□□□ -1.99
TOPBP1Q92547 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.61□□□□□ -1.99
TOPBP1Q92547 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.61□□□□□ -1.99
TOPBP1Q92547 AC135279.1-201ENST00000543493 504 ntBASIC2.61□□□□□ -1.99
TOPBP1Q92547 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.61□□□□□ -1.99
TOPBP1Q92547 AC008015.1-201ENST00000555505 465 ntBASIC2.61□□□□□ -1.99
TOPBP1Q92547 MIR3618-201ENST00000580330 88 ntBASIC2.61□□□□□ -1.99
TOPBP1Q92547 AC098679.5-201ENST00000624394 571 ntBASIC2.61□□□□□ -1.99
TOPBP1Q92547 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
TOPBP1Q92547 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TOPBP1Q92547 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
TOPBP1Q92547 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
TOPBP1Q92547 RNU6-1-201ENST00000383898 107 ntBASIC2.6□□□□□ -1.99
TOPBP1Q92547 RNU6-42P-201ENST00000384165 107 ntBASIC2.6□□□□□ -1.99
TOPBP1Q92547 RNU6-36P-201ENST00000384172 107 ntBASIC2.6□□□□□ -1.99
TOPBP1Q92547 RNU6-4P-201ENST00000384205 107 ntBASIC2.6□□□□□ -1.99
TOPBP1Q92547 RNU6-5P-201ENST00000384238 107 ntBASIC2.6□□□□□ -1.99
TOPBP1Q92547 RNU6-3P-201ENST00000384314 107 ntBASIC2.6□□□□□ -1.99
TOPBP1Q92547 RNU6-2-201ENST00000384627 107 ntBASIC2.6□□□□□ -1.99
TOPBP1Q92547 RNU6-9-201ENST00000384776 107 ntBASIC2.6□□□□□ -1.99
TOPBP1Q92547 RNU6-33P-201ENST00000384793 107 ntBASIC2.6□□□□□ -1.99
TOPBP1Q92547 RPL23AP29-201ENST00000397284 453 ntBASIC2.6□□□□□ -1.99
TOPBP1Q92547 AC092638.1-201ENST00000411966 1275 ntBASIC2.6□□□□□ -1.99
TOPBP1Q92547 AC090071.1-201ENST00000507713 644 ntBASIC2.6□□□□□ -1.99
TOPBP1Q92547 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.6□□□□□ -1.99
TOPBP1Q92547 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.6□□□□□ -1.99
TOPBP1Q92547 AC115989.2-201ENST00000578640 563 ntBASIC2.6□□□□□ -1.99
TOPBP1Q92547 AC011468.4-201ENST00000603942 409 ntBASIC2.6□□□□□ -1.99
TOPBP1Q92547 RNU6-6P-201ENST00000606623 107 ntBASIC2.6□□□□□ -1.99
TOPBP1Q92547 OR10AB1P-201ENST00000609613 938 ntBASIC2.6□□□□□ -1.99
TOPBP1Q92547 MIR7973-1-201ENST00000614683 76 ntBASIC2.6□□□□□ -1.99
TOPBP1Q92547 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TOPBP1Q92547 ZNF209P-201ENST00000593450 2304 ntBASIC2.6□□□□□ -1.99
TOPBP1Q92547 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TOPBP1Q92547 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TOPBP1Q92547 MIR517C-201ENST00000385103 95 ntBASIC2.59□□□□□ -1.99
TOPBP1Q92547 HMGN2P35-201ENST00000412164 270 ntBASIC2.59□□□□□ -1.99
TOPBP1Q92547 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TOPBP1Q92547 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.59□□□□□ -1.99
TOPBP1Q92547 RPL37P6-202ENST00000464216 403 ntBASIC2.59□□□□□ -1.99
TOPBP1Q92547 LTV1P1-201ENST00000510683 1237 ntBASIC2.59□□□□□ -1.99
TOPBP1Q92547 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.59□□□□□ -1.99
TOPBP1Q92547 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.59□□□□□ -1.99
TOPBP1Q92547 OR6C73P-201ENST00000546432 358 ntBASIC2.59□□□□□ -1.99
TOPBP1Q92547 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.59□□□□□ -1.99
TOPBP1Q92547 AC115085.1-201ENST00000588924 229 ntBASIC2.59□□□□□ -1.99
TOPBP1Q92547 AC104307.1-201ENST00000616142 196 ntBASIC2.59□□□□□ -1.99
TOPBP1Q92547 AL353770.2-201ENST00000620024 78 ntBASIC2.59□□□□□ -1.99
TOPBP1Q92547 PVT1_3.1-201ENST00000620853 95 ntBASIC2.59□□□□□ -1.99
TOPBP1Q92547 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TOPBP1Q92547 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.59□□□□□ -1.99
TOPBP1Q92547 AC008568.2-201ENST00000623862 2313 ntBASIC2.59□□□□□ -1.99
TOPBP1Q92547 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -2
TOPBP1Q92547 RPL26P37-201ENST00000411983 438 ntBASIC2.58□□□□□ -2
TOPBP1Q92547 USP9YP27-201ENST00000418455 438 ntBASIC2.58□□□□□ -2
TOPBP1Q92547 AC092754.2-201ENST00000463506 460 ntBASIC2.58□□□□□ -2
TOPBP1Q92547 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.58□□□□□ -2
TOPBP1Q92547 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms