Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 LARP1BP2-201ENST00000486594 519 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 RPL23AP55-201ENST00000498163 452 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AC107934.2-201ENST00000518653 310 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AC004024.1-201ENST00000549244 247 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AGGF1P4-201ENST00000568249 801 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AC012213.3-201ENST00000577199 777 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AC067852.3-201ENST00000589177 561 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AC068790.2-201ENST00000602601 557 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 MIR92B-201ENST00000607575 96 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AC092354.2-201ENST00000607786 514 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AC103591.3-201ENST00000608684 209 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AP000254.1-201ENST00000609934 520 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AC109347.2-201ENST00000610220 349 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AC104073.3-201ENST00000610942 955 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AC131902.3-201ENST00000611767 581 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AL590240.3-201ENST00000621416 943 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AC098679.4-201ENST00000624241 654 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AC007823.1-201ENST00000569932 1566 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AL645937.1-201ENST00000641739 1652 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AC092125.1-201ENST00000562568 1995 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AC007496.3-201ENST00000624987 3443 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 SNORA31-201ENST00000362607 130 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 RNU6-1155P-201ENST00000363554 107 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 MIR670-201ENST00000390142 98 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 SNORA40.3-201ENST00000390964 122 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 RNU2-47P-201ENST00000410649 186 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 DBIP2-201ENST00000419076 262 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 HMGN1P18-201ENST00000457642 277 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 snoU109.1-201ENST00000459339 135 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 RPL23AP67-201ENST00000465341 474 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 RPL23AP41-201ENST00000484754 458 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AP002812.1-201ENST00000495378 474 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 PHBP14-201ENST00000512887 367 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 RNU6-528P-201ENST00000516926 100 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AP003467.2-201ENST00000520175 319 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AP004371.1-201ENST00000525240 214 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AP002453.2-201ENST00000533503 320 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AC087683.1-201ENST00000591187 441 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AC079089.3-201ENST00000603094 673 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AC012669.1-201ENST00000603209 283 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 SNORA50A-202ENST00000629536 136 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AC119674.1-207ENST00000641355 633 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AC032011.1-201ENST00000611703 1549 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 AL365440.1-201ENST00000436135 2167 ntBASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SLC44A1Q8WWI5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 SNORD9-201ENST00000362566 104 ntBASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 SNORA7.2-201ENST00000364446 145 ntBASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 RNU6-629P-201ENST00000384061 103 ntBASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 RNU6-348P-201ENST00000384386 107 ntBASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 RNU6-297P-201ENST00000384636 107 ntBASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 RNA5SP171-201ENST00000391071 115 ntBASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 RNA5SP107-201ENST00000411358 122 ntBASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 AC078974.1-201ENST00000411597 223 ntBASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 RAB9AP3-201ENST00000412737 573 ntBASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 MTCO3P41-201ENST00000414801 328 ntBASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 USP9YP13-201ENST00000417797 480 ntBASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 OR1AA1P-201ENST00000419597 916 ntBASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 AL137014.1-201ENST00000420490 1226 ntBASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 AC018644.1-201ENST00000429934 551 ntBASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 DLGAP5P1-201ENST00000430307 464 ntBASIC3.47□□□□□ -1.85
SLC44A1Q8WWI5 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms