Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.89□□□□□ -1.95
COL22A1Q8NFW1 AL391813.2-201ENST00000609113 322 ntBASIC2.89□□□□□ -1.95
COL22A1Q8NFW1 AC091834.1-201ENST00000614543 472 ntBASIC2.89□□□□□ -1.95
COL22A1Q8NFW1 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.89□□□□□ -1.95
COL22A1Q8NFW1 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.89□□□□□ -1.95
COL22A1Q8NFW1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL22A1Q8NFW1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL22A1Q8NFW1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 MIR16-1-201ENST00000385271 89 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 BX664727.1-201ENST00000416024 466 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 RPL17P49-201ENST00000443728 411 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 OR51B8P-201ENST00000449892 769 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 AC004263.1-201ENST00000479327 332 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 AC118282.2-201ENST00000508739 374 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 AC048346.1-201ENST00000510247 144 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 MIR4789-201ENST00000577469 82 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 AC124283.4-201ENST00000581815 456 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 SNORD39.3-201ENST00000584451 71 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 AC023043.3-201ENST00000593113 385 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 AC098483.2-201ENST00000603158 454 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 XIAPP1-201ENST00000603162 600 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 MIR8084-201ENST00000614105 89 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 MIR6132-201ENST00000622083 109 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 AL160394.1-201ENST00000624765 724 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 ZNF849P-201ENST00000594711 1566 ntBASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL22A1Q8NFW1 RNU6-115P-201ENST00000364310 107 ntBASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 RNU6-339P-201ENST00000384310 107 ntBASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 RNU6-921P-201ENST00000384361 107 ntBASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 MIR583-201ENST00000384846 75 ntBASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 RPL23AP16-201ENST00000441715 421 ntBASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 AC104073.1-201ENST00000451988 151 ntBASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 AP000705.1-201ENST00000454567 350 ntBASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 snoU13.18-201ENST00000459483 104 ntBASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 AC092754.2-201ENST00000463506 460 ntBASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 RPS23P3-201ENST00000470993 430 ntBASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 AC012181.1-201ENST00000479895 423 ntBASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 AC121161.1-201ENST00000510606 652 ntBASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 ZNF705CP-201ENST00000530515 889 ntBASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 AP002906.1-201ENST00000603405 233 ntBASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 AC108479.2-201ENST00000617314 601 ntBASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 AC018755.4-201ENST00000619715 454 ntBASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 AC020923.1-201ENST00000624021 917 ntBASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL22A1Q8NFW1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 Y_RNA.355-201ENST00000365462 98 ntBASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 SNORA48.3-201ENST00000391081 134 ntBASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 AL133384.1-201ENST00000412744 351 ntBASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 OR4K11P-201ENST00000431829 904 ntBASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 AC126177.3-201ENST00000551839 688 ntBASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 CU459211.1-201ENST00000635667 749 ntBASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 AC111188.2-201ENST00000529697 1387 ntBASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 AP001486.2-201ENST00000561652 5113 ntBASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 MIR378A-201ENST00000362177 66 ntBASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 RNU6-457P-201ENST00000363999 107 ntBASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 RN7SKP226-201ENST00000364912 300 ntBASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 RNU6-821P-201ENST00000390995 107 ntBASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 MTCO2P31-201ENST00000402702 684 ntBASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 TAF13P2-201ENST00000416876 286 ntBASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 SSXP4-201ENST00000451349 245 ntBASIC2.86□□□□□ -1.95
COL22A1Q8NFW1 MTCO3P2-201ENST00000457365 171 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms