Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RNA5SP507-201ENST00000363603 121 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 RNU6-946P-201ENST00000383878 107 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 Y_RNA.384-201ENST00000383909 102 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 Y_RNA.387-201ENST00000383918 102 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 RNU1-106P-201ENST00000384382 164 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 RNU6-1060P-201ENST00000384664 107 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 MIR1178-201ENST00000408396 91 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 RN7SKP213-201ENST00000410746 298 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 RNU4-46P-201ENST00000410818 138 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 RPL30P2-201ENST00000414021 291 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AC093162.1-201ENST00000419682 124 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AF228730.4-201ENST00000421457 183 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AC090774.1-201ENST00000435925 246 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 CEACAMP7-201ENST00000444105 496 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AL513533.1-201ENST00000453728 415 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 SNORD19B-201ENST00000459623 84 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AC005532.2-201ENST00000467154 373 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 S100A11P1-201ENST00000477525 312 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 RPSAP50-201ENST00000481955 852 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 RBBP4P6-201ENST00000508098 202 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 RN7SKP13-201ENST00000515933 244 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 RNU6-685P-201ENST00000517088 95 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AC126177.3-201ENST00000551839 688 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AL121576.1-201ENST00000556055 276 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 MIR3942-201ENST00000585264 109 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 POLR3GP2-201ENST00000588366 668 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AC020910.2-201ENST00000603635 610 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 PART1_1.1-201ENST00000611761 217 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AC099669.2-201ENST00000616549 437 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 U73479.1-201ENST00000618062 168 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AL589994.2-201ENST00000621124 579 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AC091905.2-201ENST00000623143 306 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 AC121333.1-201ENST00000567488 2709 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 MAPK10-263ENST00000641052 4307 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 A2MP1-204ENST00000566278 4130 ntBASIC4.39□□□□□ -1.71
HIPK4Q8NE63 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.39□□□□□ -1.71
HIPK4Q8NE63 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 RNA5SP22-201ENST00000365393 109 ntBASIC4.38□□□□□ -1.71
HIPK4Q8NE63 RNU1-44P-201ENST00000384453 163 ntBASIC4.38□□□□□ -1.71
HIPK4Q8NE63 AL583834.1-201ENST00000406943 343 ntBASIC4.38□□□□□ -1.71
HIPK4Q8NE63 RNU6-387P-201ENST00000411331 105 ntBASIC4.38□□□□□ -1.71
HIPK4Q8NE63 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 RPS23P10-201ENST00000416185 486 ntBASIC4.38□□□□□ -1.71
HIPK4Q8NE63 AC099677.1-201ENST00000420575 175 ntBASIC4.38□□□□□ -1.71
HIPK4Q8NE63 RPL21P112-201ENST00000434403 463 ntBASIC4.38□□□□□ -1.71
HIPK4Q8NE63 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 AC091868.1-201ENST00000508746 304 ntBASIC4.38□□□□□ -1.71
HIPK4Q8NE63 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 AF038458.1-201ENST00000588406 262 ntBASIC4.38□□□□□ -1.71
HIPK4Q8NE63 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 FAM27B-201ENST00000610601 213 ntBASIC4.38□□□□□ -1.71
HIPK4Q8NE63 uc_338.15-201ENST00000615470 191 ntBASIC4.38□□□□□ -1.71
HIPK4Q8NE63 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 AL133412.1-201ENST00000380194 2992 ntBASIC4.38□□□□□ -1.71
HIPK4Q8NE63 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HIPK4Q8NE63 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
HIPK4Q8NE63 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HIPK4Q8NE63 AC012618.3-205ENST00000637896 1496 ntBASIC4.37□□□□□ -1.71
HIPK4Q8NE63 AL391684.1-202ENST00000641293 1636 ntBASIC4.37□□□□□ -1.71
HIPK4Q8NE63 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HIPK4Q8NE63 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HIPK4Q8NE63 XIAPP3-201ENST00000312918 795 ntBASIC4.37□□□□□ -1.71
HIPK4Q8NE63 RN7SKP95-201ENST00000362860 303 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms