Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RETREG2Q8NC44 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
RETREG2Q8NC44 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RETREG2Q8NC44 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
RETREG2Q8NC44 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RETREG2Q8NC44 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.64□□□□□ -1.51
RETREG2Q8NC44 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RETREG2Q8NC44 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RETREG2Q8NC44 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RETREG2Q8NC44 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RETREG2Q8NC44 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.64□□□□□ -1.51
RETREG2Q8NC44 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RETREG2Q8NC44 Y_RNA.315-201ENST00000365117 102 ntBASIC5.64□□□□□ -1.51
RETREG2Q8NC44 AL035079.1-201ENST00000405210 287 ntBASIC5.64□□□□□ -1.51
RETREG2Q8NC44 MIR1302-11-201ENST00000408051 138 ntBASIC5.64□□□□□ -1.51
RETREG2Q8NC44 U3.32-201ENST00000408116 212 ntBASIC5.64□□□□□ -1.51
RETREG2Q8NC44 MIR1302-9-201ENST00000408365 138 ntBASIC5.64□□□□□ -1.51
RETREG2Q8NC44 MIR1302-10-201ENST00000408734 138 ntBASIC5.64□□□□□ -1.51
RETREG2Q8NC44 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.64□□□□□ -1.51
RETREG2Q8NC44 AL669831.1-202ENST00000428504 417 ntBASIC5.64□□□□□ -1.51
RETREG2Q8NC44 COX6CP13-201ENST00000428703 226 ntBASIC5.64□□□□□ -1.51
RETREG2Q8NC44 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.64□□□□□ -1.51
RETREG2Q8NC44 RPL23AP89-201ENST00000439324 255 ntBASIC5.64□□□□□ -1.51
RETREG2Q8NC44 AC073264.2-201ENST00000448886 166 ntBASIC5.64□□□□□ -1.51
RETREG2Q8NC44 RN7SL354P-201ENST00000469282 294 ntBASIC5.64□□□□□ -1.51
RETREG2Q8NC44 SCARNA15.1-201ENST00000516384 125 ntBASIC5.64□□□□□ -1.51
RETREG2Q8NC44 Y_RNA.701-201ENST00000516812 110 ntBASIC5.64□□□□□ -1.51
RETREG2Q8NC44 AC091042.1-201ENST00000579213 173 ntBASIC5.64□□□□□ -1.51
RETREG2Q8NC44 MIR1302-2-201ENST00000607096 138 ntBASIC5.64□□□□□ -1.51
RETREG2Q8NC44 AC135507.2-201ENST00000612443 309 ntBASIC5.64□□□□□ -1.51
RETREG2Q8NC44 MIR6780A-201ENST00000615089 68 ntBASIC5.64□□□□□ -1.51
RETREG2Q8NC44 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.64□□□□□ -1.51
RETREG2Q8NC44 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
RETREG2Q8NC44 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RETREG2Q8NC44 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RETREG2Q8NC44 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 AC063976.2-201ENST00000425667 3556 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 AC079741.1-201ENST00000321498 212 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 RNU6-1167P-201ENST00000363227 94 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 RNU6-254P-201ENST00000363377 107 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 RNU6-45P-201ENST00000384471 107 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 Y_RNA.534-201ENST00000384599 112 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 AC074085.1-201ENST00000413598 418 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 HSPD1P21-201ENST00000436541 245 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 RPL7AP61-201ENST00000443410 636 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 RPL21P41-201ENST00000459863 264 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 AC091180.1-201ENST00000462104 372 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 RN7SL385P-201ENST00000468873 276 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 RNU6-1256P-201ENST00000516539 103 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 MIR548AC-201ENST00000585049 88 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 MIR3942-201ENST00000585264 109 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 ATP1B3P1-201ENST00000605365 821 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 AP005432.2-201ENST00000608162 586 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 PART1_1.1-201ENST00000611761 217 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 AL133216.2-202ENST00000634512 349 ntBASIC5.63□□□□□ -1.51
RETREG2Q8NC44 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RETREG2Q8NC44 Z95331.1-201ENST00000623075 23112 ntBASIC5.62□□□□□ -1.51
RETREG2Q8NC44 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RETREG2Q8NC44 PCAT14-202ENST00000627127 3935 ntBASIC5.62□□□□□ -1.51
RETREG2Q8NC44 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RETREG2Q8NC44 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RETREG2Q8NC44 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RETREG2Q8NC44 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.62□□□□□ -1.51
RETREG2Q8NC44 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RETREG2Q8NC44 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RETREG2Q8NC44 SNORA31-201ENST00000362607 130 ntBASIC5.62□□□□□ -1.51
RETREG2Q8NC44 Y_RNA.58-201ENST00000362807 102 ntBASIC5.62□□□□□ -1.51
RETREG2Q8NC44 Y_RNA.154-201ENST00000363624 102 ntBASIC5.62□□□□□ -1.51
RETREG2Q8NC44 RNA5SP505-201ENST00000364748 108 ntBASIC5.62□□□□□ -1.51
RETREG2Q8NC44 RNY3P1-201ENST00000365085 102 ntBASIC5.62□□□□□ -1.51
RETREG2Q8NC44 RNY3-201ENST00000365484 102 ntBASIC5.62□□□□□ -1.51
RETREG2Q8NC44 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RETREG2Q8NC44 RNU6-741P-201ENST00000383889 107 ntBASIC5.62□□□□□ -1.51
RETREG2Q8NC44 SNORA2.3-201ENST00000383920 135 ntBASIC5.62□□□□□ -1.51
RETREG2Q8NC44 RNU6-128P-201ENST00000383976 107 ntBASIC5.62□□□□□ -1.51
RETREG2Q8NC44 Y_RNA.490-201ENST00000384413 102 ntBASIC5.62□□□□□ -1.51
RETREG2Q8NC44 RNU6-1297P-201ENST00000384415 104 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms