Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 CCNG1P1-201ENST00000406783 885 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 RN7SKP142-201ENST00000411236 328 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 AC099677.1-201ENST00000420575 175 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.99□□□□□ -1.77
USP38Q8NB14 AC109583.1-201ENST00000432156 268 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.99□□□□□ -1.77
USP38Q8NB14 AC108734.1-201ENST00000439549 399 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 COX6CP2-201ENST00000444980 225 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 AL590365.1-201ENST00000450788 243 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 AL136097.1-201ENST00000456945 913 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.99□□□□□ -1.77
USP38Q8NB14 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.99□□□□□ -1.77
USP38Q8NB14 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
USP38Q8NB14 AC093278.1-201ENST00000494700 600 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 KLHL2P1-201ENST00000508691 521 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.99□□□□□ -1.77
USP38Q8NB14 AC103783.1-201ENST00000520506 373 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 OR5D17P-201ENST00000531492 978 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 AC018630.1-201ENST00000541376 925 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.99□□□□□ -1.77
USP38Q8NB14 AC012182.1-201ENST00000570133 895 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 NBR2-204ENST00000587322 63 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 AC012065.4-201ENST00000602445 679 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 AC006254.3-201ENST00000603353 884 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 AC006023.1-201ENST00000603944 259 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 AL033523.1-201ENST00000605153 153 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.99□□□□□ -1.77
USP38Q8NB14 U7.8-201ENST00000619968 63 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 AC110801.1-201ENST00000623590 212 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 AC112204.3-201ENST00000623822 332 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.99□□□□□ -1.77
USP38Q8NB14 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.99□□□□□ -1.77
USP38Q8NB14 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP38Q8NB14 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
USP38Q8NB14 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.98□□□□□ -1.77
USP38Q8NB14 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.98□□□□□ -1.77
USP38Q8NB14 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
USP38Q8NB14 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
USP38Q8NB14 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.98□□□□□ -1.77
USP38Q8NB14 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
USP38Q8NB14 MTHFD2P2-201ENST00000407725 247 ntBASIC3.98□□□□□ -1.77
USP38Q8NB14 CCDC58P2-201ENST00000417131 366 ntBASIC3.98□□□□□ -1.77
USP38Q8NB14 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.98□□□□□ -1.77
USP38Q8NB14 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.98□□□□□ -1.77
USP38Q8NB14 AL121871.1-201ENST00000443413 436 ntBASIC3.98□□□□□ -1.77
USP38Q8NB14 RAC1P7-201ENST00000445367 377 ntBASIC3.98□□□□□ -1.77
USP38Q8NB14 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.98□□□□□ -1.77
USP38Q8NB14 AP1S2P1-201ENST00000457344 379 ntBASIC3.98□□□□□ -1.77
USP38Q8NB14 SNORD121B-201ENST00000458838 81 ntBASIC3.98□□□□□ -1.77
USP38Q8NB14 snoU13.4-201ENST00000458916 104 ntBASIC3.98□□□□□ -1.77
USP38Q8NB14 RN7SL504P-201ENST00000494496 287 ntBASIC3.98□□□□□ -1.77
USP38Q8NB14 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.98□□□□□ -1.77
USP38Q8NB14 PHBP14-201ENST00000512887 367 ntBASIC3.98□□□□□ -1.77
USP38Q8NB14 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USP38Q8NB14 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.98□□□□□ -1.77
USP38Q8NB14 RNU6-798P-201ENST00000516912 103 ntBASIC3.98□□□□□ -1.77
USP38Q8NB14 RPL12P22-201ENST00000519073 490 ntBASIC3.98□□□□□ -1.77
USP38Q8NB14 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.98□□□□□ -1.77
USP38Q8NB14 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.98□□□□□ -1.77
USP38Q8NB14 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.98□□□□□ -1.77
USP38Q8NB14 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USP38Q8NB14 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.98□□□□□ -1.77
USP38Q8NB14 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.98□□□□□ -1.77
USP38Q8NB14 MIR4738-201ENST00000579134 87 ntBASIC3.98□□□□□ -1.77
USP38Q8NB14 AP005136.1-201ENST00000579765 429 ntBASIC3.98□□□□□ -1.77
USP38Q8NB14 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.98□□□□□ -1.77
USP38Q8NB14 AL022099.1-201ENST00000604551 712 ntBASIC3.98□□□□□ -1.77
USP38Q8NB14 OR10AB1P-201ENST00000609613 938 ntBASIC3.98□□□□□ -1.77
USP38Q8NB14 AL590282.1-201ENST00000610379 1136 ntBASIC3.98□□□□□ -1.77
USP38Q8NB14 AC009090.3-201ENST00000616553 565 ntBASIC3.98□□□□□ -1.77
USP38Q8NB14 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USP38Q8NB14 MTND4P4-201ENST00000439033 1366 ntBASIC3.98□□□□□ -1.77
USP38Q8NB14 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USP38Q8NB14 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
USP38Q8NB14 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP38Q8NB14 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
USP38Q8NB14 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.97□□□□□ -1.77
USP38Q8NB14 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
USP38Q8NB14 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
USP38Q8NB14 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP38Q8NB14 Y_RNA.77-201ENST00000362962 107 ntBASIC3.97□□□□□ -1.77
USP38Q8NB14 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.97□□□□□ -1.77
USP38Q8NB14 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
USP38Q8NB14 MIR607-201ENST00000385241 96 ntBASIC3.97□□□□□ -1.77
USP38Q8NB14 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.97□□□□□ -1.77
USP38Q8NB14 AC007390.1-201ENST00000415722 356 ntBASIC3.97□□□□□ -1.77
USP38Q8NB14 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.97□□□□□ -1.77
USP38Q8NB14 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.97□□□□□ -1.77
USP38Q8NB14 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.97□□□□□ -1.77
USP38Q8NB14 AC005019.1-201ENST00000436455 431 ntBASIC3.97□□□□□ -1.77
USP38Q8NB14 AC025750.2-201ENST00000442609 450 ntBASIC3.97□□□□□ -1.77
USP38Q8NB14 USP9YP12-201ENST00000450481 570 ntBASIC3.97□□□□□ -1.77
USP38Q8NB14 AC099563.1-201ENST00000456086 418 ntBASIC3.97□□□□□ -1.77
USP38Q8NB14 S100A11P2-201ENST00000467589 312 ntBASIC3.97□□□□□ -1.77
USP38Q8NB14 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.97□□□□□ -1.77
USP38Q8NB14 KC877373.1-201ENST00000479066 408 ntBASIC3.97□□□□□ -1.77
USP38Q8NB14 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.97□□□□□ -1.77
USP38Q8NB14 AC096751.1-202ENST00000502691 1067 ntBASIC3.97□□□□□ -1.77
USP38Q8NB14 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.97□□□□□ -1.77
USP38Q8NB14 HMGB1P22-201ENST00000505315 124 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms