Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 RNU5A-6P-201ENST00000384136 116 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 Y_RNA.582-201ENST00000391023 95 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 RNA5SP239-201ENST00000410218 129 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 RNU4-65P-201ENST00000410473 140 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 SSXP9-201ENST00000417503 292 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC010975.2-201ENST00000427781 588 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 TIMM9P1-201ENST00000436122 256 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 MTCYBP1-201ENST00000454315 1119 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 snoU13.22-201ENST00000459428 104 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC106707.2-201ENST00000484182 374 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC135721.1-201ENST00000497954 479 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 KLHL2P1-201ENST00000508691 521 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 DUXAP2-201ENST00000519198 589 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC107934.1-201ENST00000522215 217 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 DEFB108D-201ENST00000527787 222 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC022880.1-201ENST00000534017 973 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 CCNG2P1-201ENST00000549521 1000 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AL391156.1-201ENST00000554965 554 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC099489.2-201ENST00000574976 260 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC068790.6-201ENST00000602558 258 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AL022099.1-201ENST00000604551 712 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AL137849.1-201ENST00000604767 169 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC245517.5-201ENST00000611529 162 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC019176.2-201ENST00000611579 315 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC093838.1-201ENST00000613014 469 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 U7.8-201ENST00000619968 63 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 C2orf27A-204ENST00000623058 969 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC243312.2-201ENST00000623340 601 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 AC019226.1-201ENST00000625666 515 ntBASIC3.43□□□□□ -1.86
BEST3Q8N1M1 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
BEST3Q8N1M1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 MFSD8-236ENST00000641509 4050 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 SNORD46.1-201ENST00000364139 104 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 RNA5SP189-201ENST00000364920 115 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 MIR607-201ENST00000385241 96 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 RNA5SP424-201ENST00000390988 115 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 RPL23AP32-201ENST00000395315 459 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 RNU2-62P-201ENST00000410868 191 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 ATP5A1P2-201ENST00000412323 255 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 CRYBB2P1-203ENST00000415709 538 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AC068533.1-201ENST00000418542 415 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 DUTP6-201ENST00000425573 462 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 MTCO1P39-201ENST00000426148 480 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 ARPC3P1-201ENST00000437218 533 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AC004866.2-201ENST00000438285 481 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 MTND1P12-201ENST00000455231 147 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 RPL7P49-201ENST00000471402 708 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 RPL31P13-201ENST00000484151 370 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AC138853.1-201ENST00000503549 823 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AC114967.1-201ENST00000504890 259 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 MLLT10P2-201ENST00000506434 249 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 RNU6-720P-201ENST00000516363 108 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 MTCO2P4-201ENST00000517968 247 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms