Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MTND2P5-201ENST00000432656 1006 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AC011816.1-201ENST00000441346 546 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AC025750.2-201ENST00000442609 450 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 ST13P20-201ENST00000447996 1065 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AC005297.2-201ENST00000450430 606 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AL353691.1-201ENST00000451332 387 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AP000705.1-201ENST00000454567 350 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AC027673.1-201ENST00000456245 405 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AL031183.1-201ENST00000457667 207 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 SNORD109B-201ENST00000458961 67 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 SNORD109A-201ENST00000459128 67 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 TMEM251P1-201ENST00000503717 318 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 CBX3P3-201ENST00000508108 532 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AC096725.1-201ENST00000514266 313 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AC091163.3-201ENST00000518269 1144 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 MTND2P7-201ENST00000521337 640 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AL391156.1-201ENST00000554965 554 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 MED28P6-201ENST00000558776 231 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 MTND3P13-201ENST00000574391 343 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AC009163.5-201ENST00000575421 637 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 GLUD1P4-201ENST00000590914 418 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 VN1R83P-201ENST00000595685 445 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AL035411.2-201ENST00000604022 421 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AL049779.4-201ENST00000604500 156 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AC018645.2-201ENST00000609151 472 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AC009570.1-201ENST00000609599 745 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 BX664608.1-201ENST00000610519 487 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AL138478.1-201ENST00000612252 832 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 MIR7106-201ENST00000612419 65 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AL138880.2-201ENST00000616214 239 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AL121895.2-201ENST00000619558 447 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AC084824.4-201ENST00000620106 731 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AC004009.2-201ENST00000623016 728 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AC004808.1-201ENST00000627671 721 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 MIR1322-201ENST00000638013 71 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 AP000526.1-201ENST00000603308 1388 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 RNU5E-10P-201ENST00000363506 118 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 MIR627-201ENST00000384979 97 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 DHFRP6-201ENST00000401776 268 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 AL355143.1-201ENST00000407101 841 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 USP9YP20-201ENST00000419224 558 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 AL590233.1-201ENST00000430017 456 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 AC092427.1-201ENST00000439177 601 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 CACYBPP2-201ENST00000453625 678 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 RPL30P14-201ENST00000482744 348 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 COX7A2P2-201ENST00000505291 250 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 RPL37P25-201ENST00000507308 276 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 AC008716.1-201ENST00000511084 513 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 RNA5SP282-201ENST00000516355 108 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 AC010376.1-201ENST00000522101 334 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 EIF4BP1-201ENST00000554881 351 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 MIR4637-201ENST00000582405 84 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 VN1R90P-201ENST00000595717 726 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 DUXAP3-201ENST00000603616 594 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 AL033523.1-201ENST00000605153 153 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 AF129408.1-201ENST00000608767 431 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 AC025588.4-201ENST00000615802 908 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 AC099654.8-201ENST00000637757 681 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 AC135776.4-201ENST00000624300 1904 ntBASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CCDC65Q8IXS2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 Y_RNA.472-201ENST00000384322 102 ntBASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 MIR135A2-201ENST00000384854 100 ntBASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 Z75741.2-201ENST00000417272 1167 ntBASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 MTND2P20-201ENST00000440805 661 ntBASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 MTATP6P14-201ENST00000455189 673 ntBASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 SUMO2P2-201ENST00000456482 255 ntBASIC2.88□□□□□ -1.95
CCDC65Q8IXS2 RNA5SP310-201ENST00000459084 116 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms