Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 COX6B1P7-201ENST00000430845 235 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 AL138799.3-201ENST00000438968 350 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.11□□□□□ -1.75
VRK3Q8IV63 RPL7L1P8-201ENST00000469911 741 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 UQCRHP4-201ENST00000471686 272 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 VN1R17P-201ENST00000472048 1090 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 RPL23AP11-201ENST00000475260 469 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 AC004062.1-201ENST00000509926 645 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 PARP4P3-201ENST00000510265 317 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VRK3Q8IV63 RNU6-864P-201ENST00000516256 108 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.11□□□□□ -1.75
VRK3Q8IV63 AC022634.1-201ENST00000520765 532 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.11□□□□□ -1.75
VRK3Q8IV63 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.11□□□□□ -1.75
VRK3Q8IV63 HIGD1AP5-201ENST00000529959 259 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VRK3Q8IV63 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.11□□□□□ -1.75
VRK3Q8IV63 AC018630.1-201ENST00000541376 925 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.11□□□□□ -1.75
VRK3Q8IV63 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.11□□□□□ -1.75
VRK3Q8IV63 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.11□□□□□ -1.75
VRK3Q8IV63 SETP2-201ENST00000553886 926 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 MTND6P33-201ENST00000571794 183 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VRK3Q8IV63 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.11□□□□□ -1.75
VRK3Q8IV63 IPO5P1-202ENST00000600039 287 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 AC068790.3-201ENST00000602988 553 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 CYP2C61P-201ENST00000604072 290 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 AP001330.4-201ENST00000604350 154 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 AC124312.5-201ENST00000604451 268 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 AL355816.1-201ENST00000607951 118 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 AL031666.3-201ENST00000609320 1006 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 AC103710.2-201ENST00000609912 942 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VRK3Q8IV63 OR52H1-202ENST00000641796 1061 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 AC009902.3-201ENST00000606235 2172 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
VRK3Q8IV63 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VRK3Q8IV63 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
VRK3Q8IV63 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.11□□□□□ -1.75
VRK3Q8IV63 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
VRK3Q8IV63 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VRK3Q8IV63 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
VRK3Q8IV63 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.11□□□□□ -1.75
VRK3Q8IV63 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VRK3Q8IV63 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.11□□□□□ -1.75
VRK3Q8IV63 AC130650.2-201ENST00000618736 2403 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.1□□□□□ -1.75
VRK3Q8IV63 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VRK3Q8IV63 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VRK3Q8IV63 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VRK3Q8IV63 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
VRK3Q8IV63 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VRK3Q8IV63 AC011155.1-201ENST00000316512 456 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
VRK3Q8IV63 Y_RNA.445-201ENST00000384168 102 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 RNU6-1207P-201ENST00000384343 107 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 RNU6-39P-201ENST00000384344 107 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 RNU6-903P-201ENST00000391270 109 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 MIR1179-201ENST00000408703 91 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.1□□□□□ -1.75
VRK3Q8IV63 RPL31P45-201ENST00000419532 356 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 EIF4EP1-201ENST00000422311 642 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 PMCHL1-202ENST00000423102 261 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 OR4K11P-201ENST00000431829 904 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.1□□□□□ -1.75
VRK3Q8IV63 TIMM9P1-201ENST00000436122 256 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 NUTF2P3-201ENST00000448540 384 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 HMGB1P15-201ENST00000453854 435 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 AC133473.1-201ENST00000455173 299 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.1□□□□□ -1.75
VRK3Q8IV63 RNU6-1218P-201ENST00000458990 108 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 Y_RNA.635-201ENST00000459041 101 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 AC010469.1-201ENST00000463864 576 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 ST13P14-201ENST00000474095 734 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.1□□□□□ -1.75
VRK3Q8IV63 OR51K1P-201ENST00000510214 950 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 AC099522.1-202ENST00000514718 367 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.1□□□□□ -1.75
VRK3Q8IV63 RNU6-347P-201ENST00000516658 105 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 RPL7P20-201ENST00000520308 745 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.1□□□□□ -1.75
VRK3Q8IV63 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.1□□□□□ -1.75
VRK3Q8IV63 AC022655.2-201ENST00000577280 318 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 AC053481.3-201ENST00000577881 843 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 OR4K8P-201ENST00000578842 1048 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 MIR4775-201ENST00000581168 75 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.1□□□□□ -1.75
VRK3Q8IV63 AC011477.5-201ENST00000586571 259 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.1□□□□□ -1.75
VRK3Q8IV63 XIAPP1-201ENST00000603162 600 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 MIR432-201ENST00000606207 94 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 AC083809.1-201ENST00000615051 472 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 AL596245.1-201ENST00000618994 362 ntBASIC4.1□□□□□ -1.75
VRK3Q8IV63 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
VRK3Q8IV63 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
VRK3Q8IV63 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms