Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.39□□□□□ -1.87
LDB1Q86U70 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB1Q86U70 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB1Q86U70 MIR3921-201ENST00000577308 85 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 MIR4429-201ENST00000580105 73 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.39□□□□□ -1.87
LDB1Q86U70 AC110760.3-201ENST00000598794 467 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 AC007038.2-201ENST00000608095 740 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 AL355472.4-201ENST00000610233 626 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 AL110115.1-201ENST00000614396 364 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 AC008121.2-201ENST00000614647 523 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 AC104010.1-201ENST00000616889 150 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.39□□□□□ -1.87
LDB1Q86U70 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.39□□□□□ -1.87
LDB1Q86U70 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
LDB1Q86U70 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
LDB1Q86U70 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
LDB1Q86U70 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LDB1Q86U70 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.39□□□□□ -1.87
LDB1Q86U70 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LDB1Q86U70 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.38□□□□□ -1.87
LDB1Q86U70 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LDB1Q86U70 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LDB1Q86U70 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.38□□□□□ -1.87
LDB1Q86U70 MIR490-201ENST00000384865 128 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 MIR218-2-201ENST00000385006 110 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 MIR1302-8-201ENST00000408342 128 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 BX323014.1-201ENST00000412876 237 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 AC126124.2-201ENST00000413542 321 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 AC007390.1-201ENST00000415722 356 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 YPEL5P1-201ENST00000419731 367 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LDB1Q86U70 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.38□□□□□ -1.87
LDB1Q86U70 AL353777.1-201ENST00000425552 326 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.38□□□□□ -1.87
LDB1Q86U70 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.38□□□□□ -1.87
LDB1Q86U70 HMGN2P31-201ENST00000432430 273 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.38□□□□□ -1.87
LDB1Q86U70 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.38□□□□□ -1.87
LDB1Q86U70 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.38□□□□□ -1.87
LDB1Q86U70 AL049734.2-201ENST00000441066 616 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 COX6CP2-201ENST00000444980 225 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 AC009961.3-201ENST00000449832 765 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 RNU7-59P-201ENST00000459101 61 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 AC114967.1-201ENST00000504890 259 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 AC093534.1-201ENST00000504977 132 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LDB1Q86U70 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.38□□□□□ -1.87
LDB1Q86U70 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.38□□□□□ -1.87
LDB1Q86U70 AL359273.1-201ENST00000510918 627 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 ARL2BPP6-201ENST00000512757 439 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 AP000857.1-201ENST00000532151 543 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 AC007458.1-201ENST00000542812 373 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
LDB1Q86U70 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.38□□□□□ -1.87
LDB1Q86U70 AP005205.1-201ENST00000563503 508 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 ACTR3BP3-201ENST00000565577 979 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 AC055876.1-202ENST00000567053 138 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.38□□□□□ -1.87
LDB1Q86U70 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.38□□□□□ -1.87
LDB1Q86U70 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.38□□□□□ -1.87
LDB1Q86U70 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.38□□□□□ -1.87
LDB1Q86U70 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.38□□□□□ -1.87
LDB1Q86U70 AL031985.2-201ENST00000600955 480 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 Z94722.1-201ENST00000604328 474 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 AC106900.2-201ENST00000604994 317 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 MIR7851-201ENST00000610611 160 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 AC073114.1-201ENST00000612027 490 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 AC009159.1-201ENST00000618386 642 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 AL603758.1-201ENST00000618654 241 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.38□□□□□ -1.87
LDB1Q86U70 AC026422.1-201ENST00000623961 452 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 AC025048.6-202ENST00000627667 438 ntBASIC3.38□□□□□ -1.87
LDB1Q86U70 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.38□□□□□ -1.87
LDB1Q86U70 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
LDB1Q86U70 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
LDB1Q86U70 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.38□□□□□ -1.87
LDB1Q86U70 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
LDB1Q86U70 TNPO1P3-201ENST00000436471 2662 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
LDB1Q86U70 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LDB1Q86U70 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LDB1Q86U70 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LDB1Q86U70 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LDB1Q86U70 RNU5A-1-201ENST00000362698 116 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 MIR23B-201ENST00000384832 97 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LDB1Q86U70 RNU6-55P-201ENST00000411092 107 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 RNU6-954P-201ENST00000411355 107 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.37□□□□□ -1.87
LDB1Q86U70 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.37□□□□□ -1.87
LDB1Q86U70 VN1R34P-201ENST00000447387 883 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 AL162389.1-201ENST00000449233 177 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 USP9YP12-201ENST00000450481 570 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.37□□□□□ -1.87
LDB1Q86U70 RBMY2UP-201ENST00000453474 324 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 SNRPFP4-201ENST00000456366 242 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 HSPE1P6-201ENST00000479457 291 ntBASIC3.37□□□□□ -1.87
LDB1Q86U70 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.37□□□□□ -1.87
LDB1Q86U70 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms