Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL590762.4-201ENST00000425885 253 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 RPL7P2-201ENST00000427639 268 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 AL360081.1-201ENST00000428299 555 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 RPL23AP31-201ENST00000456160 467 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 COX6B1P2-201ENST00000489624 230 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 RNU4-71P-201ENST00000516258 113 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 HMGN1P28-201ENST00000521340 364 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 AC006116.3-201ENST00000592968 361 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 AC006272.2-201ENST00000594725 163 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 AC004832.4-201ENST00000608952 331 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 CR392039.4-201ENST00000624968 501 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 AC073869.10-201ENST00000642016 354 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 AC063976.2-201ENST00000425667 3556 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 AL592148.3-201ENST00000608771 2646 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 Y_RNA.471-201ENST00000384312 102 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 RNU6-1226P-201ENST00000384317 107 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 MIR215-201ENST00000384858 110 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 AL139039.1-201ENST00000401900 692 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 RNA5SP111-201ENST00000411386 101 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 AL139156.1-201ENST00000412785 841 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 SYF2P2-201ENST00000417620 583 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 RPL23AP25-201ENST00000430973 463 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 BX323845.1-201ENST00000432417 179 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 RPL35AP21-201ENST00000437667 333 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 AC005094.1-201ENST00000440420 368 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 Y_RNA.644-201ENST00000459006 113 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 SNORD97-201ENST00000459187 142 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 RN7SL329P-201ENST00000467740 299 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 RPL7P49-201ENST00000471402 708 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 AC087385.1-201ENST00000475062 312 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 AC107393.1-201ENST00000512403 346 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 Y_RNA.674-201ENST00000516362 113 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 AC087441.2-201ENST00000529141 262 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 VN1R91P-201ENST00000594377 169 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 AC012669.1-201ENST00000603209 283 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 AL390123.1-201ENST00000603216 237 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 AL158032.1-201ENST00000605401 106 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 AC002044.1-201ENST00000606707 158 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 AL359547.2-201ENST00000615810 418 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 MIR6730-201ENST00000622213 67 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 CDC27P2-201ENST00000425026 1922 ntBASIC4.61□□□□□ -1.67
ATG4DQ86TL0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
ATG4DQ86TL0 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 AC100778.3-201ENST00000580060 1750 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 AL391987.6-201ENST00000305671 199 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 XIAPP3-201ENST00000312918 795 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 SNORD82-201ENST00000365530 70 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 RNU6-946P-201ENST00000383878 107 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 Y_RNA.526-201ENST00000384572 110 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 U3.36-201ENST00000408418 213 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms