Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 Vault.3-201ENST00000516676 95 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 AC007991.1-201ENST00000522680 631 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 AC008489.1-201ENST00000524271 483 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 HIF1AP1-201ENST00000553642 175 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 SUB1P2-201ENST00000556401 297 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 AL359212.1-201ENST00000556608 614 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 BBIP1P1-201ENST00000602999 279 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 AC025946.2-201ENST00000603398 234 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 AC135507.2-201ENST00000612443 309 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 YWHAEP7-203ENST00000622054 312 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 AC091953.2-201ENST00000623979 160 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AC073073.2-201ENST00000609827 2578 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AC022893.2-201ENST00000564832 3296 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 RNU4-73P-201ENST00000363164 141 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 RNU6-1322P-201ENST00000364309 107 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 Y_RNA.481-201ENST00000384373 102 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 RNU6-878P-201ENST00000384578 110 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 Y_RNA.529-201ENST00000384586 119 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AL023807.1-201ENST00000407932 359 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 RNU6-628P-201ENST00000410675 107 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AC127391.1-201ENST00000411737 98 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AL138785.1-201ENST00000425821 331 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AL035410.1-201ENST00000427409 427 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AL591419.1-201ENST00000427423 339 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 RPL23AP74-201ENST00000437246 471 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 RPS29P7-201ENST00000439662 171 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 RPS15AP9-201ENST00000439856 381 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AL049734.2-201ENST00000441066 616 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AC005297.2-201ENST00000450430 606 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AL162388.1-201ENST00000450912 352 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 TRBV26-201ENST00000456572 344 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 RPL7P15-201ENST00000461190 712 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AC083798.1-201ENST00000472671 131 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AC023194.1-201ENST00000493084 308 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AC079382.1-201ENST00000493346 557 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 MTCO3P9-201ENST00000506989 781 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 LRRC34P2-201ENST00000514850 553 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 RNU6-1153P-201ENST00000516760 105 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 RNU6-1220P-201ENST00000517126 108 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AC107934.1-201ENST00000522215 217 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AC022861.1-201ENST00000522981 663 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 OR5AL2P-201ENST00000532185 920 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AL121576.1-201ENST00000556055 276 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 HMGB3P26-201ENST00000560051 582 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 MIR3160-1-201ENST00000577972 85 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AP001429.1-201ENST00000602568 530 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 BNIP3P10-201ENST00000605360 577 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AL161734.1-201ENST00000609720 557 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AL355472.4-201ENST00000610233 626 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AL133173.2-201ENST00000614270 90 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AC068722.2-201ENST00000618734 544 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AL356585.4-201ENST00000623078 1229 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 MTND1P37-201ENST00000636562 264 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 AC007529.1-201ENST00000418574 2178 ntBASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
ZNF549Q6P9A3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms