Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 U3.40-201ENST00000408706 208 ntBASIC1.34□□□□□ -2.19
RIF1Q5UIP0 USP9YP33-201ENST00000412220 421 ntBASIC1.34□□□□□ -2.19
RIF1Q5UIP0 RPL7P53-201ENST00000421245 739 ntBASIC1.34□□□□□ -2.19
RIF1Q5UIP0 EZH2P1-201ENST00000431167 291 ntBASIC1.34□□□□□ -2.19
RIF1Q5UIP0 USP9YP35-201ENST00000435696 412 ntBASIC1.34□□□□□ -2.19
RIF1Q5UIP0 MTCYBP12-201ENST00000440559 1134 ntBASIC1.34□□□□□ -2.19
RIF1Q5UIP0 DYNLL1P5-201ENST00000467158 270 ntBASIC1.34□□□□□ -2.19
RIF1Q5UIP0 DUXAP5-201ENST00000529668 529 ntBASIC1.34□□□□□ -2.19
RIF1Q5UIP0 AC083806.3-201ENST00000614016 455 ntBASIC1.34□□□□□ -2.19
RIF1Q5UIP0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.34□□□□□ -2.19
RIF1Q5UIP0 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.34□□□□□ -2.2
RIF1Q5UIP0 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.34□□□□□ -2.2
RIF1Q5UIP0 ATG10-AS1-201ENST00000504846 648 ntBASIC1.34□□□□□ -2.2
RIF1Q5UIP0 AC008837.2-201ENST00000513076 418 ntBASIC1.34□□□□□ -2.2
RIF1Q5UIP0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.34□□□□□ -2.2
RIF1Q5UIP0 MIR4448-201ENST00000584360 86 ntBASIC1.34□□□□□ -2.2
RIF1Q5UIP0 AC073413.2-201ENST00000604332 360 ntBASIC1.34□□□□□ -2.2
RIF1Q5UIP0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
RIF1Q5UIP0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
RIF1Q5UIP0 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
RIF1Q5UIP0 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.33□□□□□ -2.2
RIF1Q5UIP0 OR4K8P-201ENST00000578842 1048 ntBASIC1.33□□□□□ -2.2
RIF1Q5UIP0 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.33□□□□□ -2.2
RIF1Q5UIP0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.33□□□□□ -2.2
RIF1Q5UIP0 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
RIF1Q5UIP0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
RIF1Q5UIP0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
RIF1Q5UIP0 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
RIF1Q5UIP0 MIR365B-201ENST00000362317 111 ntBASIC1.33□□□□□ -2.2
RIF1Q5UIP0 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.33□□□□□ -2.2
RIF1Q5UIP0 NDUFS5P3-201ENST00000450668 321 ntBASIC1.33□□□□□ -2.2
RIF1Q5UIP0 AC078918.1-201ENST00000498515 228 ntBASIC1.33□□□□□ -2.2
RIF1Q5UIP0 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.33□□□□□ -2.2
RIF1Q5UIP0 AP003033.1-201ENST00000527244 415 ntBASIC1.33□□□□□ -2.2
RIF1Q5UIP0 MTND5P21-201ENST00000531961 522 ntBASIC1.33□□□□□ -2.2
RIF1Q5UIP0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.33□□□□□ -2.2
RIF1Q5UIP0 AL049779.4-201ENST00000604500 156 ntBASIC1.33□□□□□ -2.2
RIF1Q5UIP0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
RIF1Q5UIP0 Y_RNA.471-201ENST00000384312 102 ntBASIC1.32□□□□□ -2.2
RIF1Q5UIP0 AIMP1P2-201ENST00000425294 312 ntBASIC1.32□□□□□ -2.2
RIF1Q5UIP0 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.32□□□□□ -2.2
RIF1Q5UIP0 RPL23AP62-201ENST00000463396 453 ntBASIC1.32□□□□□ -2.2
RIF1Q5UIP0 AP000926.1-201ENST00000479573 241 ntBASIC1.32□□□□□ -2.2
RIF1Q5UIP0 GTF2IP9-201ENST00000502460 301 ntBASIC1.32□□□□□ -2.2
RIF1Q5UIP0 RNA5SP436-201ENST00000516020 115 ntBASIC1.32□□□□□ -2.2
RIF1Q5UIP0 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.32□□□□□ -2.2
RIF1Q5UIP0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
RIF1Q5UIP0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.32□□□□□ -2.2
RIF1Q5UIP0 RNU6-716P-201ENST00000365621 103 ntBASIC1.32□□□□□ -2.2
RIF1Q5UIP0 RPL30P3-201ENST00000424262 333 ntBASIC1.32□□□□□ -2.2
RIF1Q5UIP0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.32□□□□□ -2.2
RIF1Q5UIP0 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.32□□□□□ -2.2
RIF1Q5UIP0 SUB1P4-201ENST00000566062 339 ntBASIC1.32□□□□□ -2.2
RIF1Q5UIP0 AC009541.1-201ENST00000438279 2662 ntBASIC1.32□□□□□ -2.2
RIF1Q5UIP0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
RIF1Q5UIP0 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
RIF1Q5UIP0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.31□□□□□ -2.2
RIF1Q5UIP0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.31□□□□□ -2.2
RIF1Q5UIP0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.31□□□□□ -2.2
RIF1Q5UIP0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.31□□□□□ -2.2
RIF1Q5UIP0 AP000873.1-201ENST00000463987 400 ntBASIC1.31□□□□□ -2.2
RIF1Q5UIP0 AC004223.1-201ENST00000479840 271 ntBASIC1.31□□□□□ -2.2
RIF1Q5UIP0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.31□□□□□ -2.2
RIF1Q5UIP0 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.31□□□□□ -2.2
RIF1Q5UIP0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.31□□□□□ -2.2
RIF1Q5UIP0 AC011890.2-201ENST00000613393 294 ntBASIC1.31□□□□□ -2.2
RIF1Q5UIP0 AC025263.3-201ENST00000622965 1396 ntBASIC1.31□□□□□ -2.2
RIF1Q5UIP0 Y_RNA.274-201ENST00000364714 101 ntBASIC1.31□□□□□ -2.2
RIF1Q5UIP0 SNORA18.2-201ENST00000383865 132 ntBASIC1.31□□□□□ -2.2
RIF1Q5UIP0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.31□□□□□ -2.2
RIF1Q5UIP0 AC005517.2-201ENST00000424673 553 ntBASIC1.31□□□□□ -2.2
RIF1Q5UIP0 VN1R96P-201ENST00000446052 858 ntBASIC1.31□□□□□ -2.2
RIF1Q5UIP0 RPS23P4-201ENST00000487908 423 ntBASIC1.31□□□□□ -2.2
RIF1Q5UIP0 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.31□□□□□ -2.2
RIF1Q5UIP0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.31□□□□□ -2.2
RIF1Q5UIP0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.31□□□□□ -2.2
RIF1Q5UIP0 OR8X1P-201ENST00000534542 869 ntBASIC1.31□□□□□ -2.2
RIF1Q5UIP0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.31□□□□□ -2.2
RIF1Q5UIP0 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
RIF1Q5UIP0 SNORA62.2-201ENST00000364672 152 ntBASIC1.3□□□□□ -2.2
RIF1Q5UIP0 MIR1304-201ENST00000408243 91 ntBASIC1.3□□□□□ -2.2
RIF1Q5UIP0 HMGN1P8-201ENST00000463578 288 ntBASIC1.3□□□□□ -2.2
RIF1Q5UIP0 AC036111.3-201ENST00000526389 112 ntBASIC1.3□□□□□ -2.2
RIF1Q5UIP0 CBX3P2-202ENST00000583365 535 ntBASIC1.3□□□□□ -2.2
RIF1Q5UIP0 AC138649.5-201ENST00000637456 137 ntBASIC1.3□□□□□ -2.2
RIF1Q5UIP0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.3□□□□□ -2.2
RIF1Q5UIP0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.3□□□□□ -2.2
RIF1Q5UIP0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.3□□□□□ -2.2
RIF1Q5UIP0 AC010265.1-201ENST00000513509 211 ntBASIC1.3□□□□□ -2.2
RIF1Q5UIP0 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.3□□□□□ -2.2
RIF1Q5UIP0 RNU1-92P-201ENST00000517017 135 ntBASIC1.3□□□□□ -2.2
RIF1Q5UIP0 RNA5SP402-201ENST00000517148 110 ntBASIC1.3□□□□□ -2.2
RIF1Q5UIP0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.3□□□□□ -2.2
RIF1Q5UIP0 PDCD5P1-201ENST00000543528 309 ntBASIC1.3□□□□□ -2.2
RIF1Q5UIP0 AC006270.2-201ENST00000578523 652 ntBASIC1.3□□□□□ -2.2
RIF1Q5UIP0 ZNF271P-202ENST00000465539 1970 ntBASIC1.3□□□□□ -2.2
RIF1Q5UIP0 DYNLT3P1-201ENST00000378574 347 ntBASIC1.29□□□□□ -2.2
RIF1Q5UIP0 RNA5SP127-201ENST00000411051 133 ntBASIC1.29□□□□□ -2.2
RIF1Q5UIP0 AC087373.1-201ENST00000524920 491 ntBASIC1.29□□□□□ -2.2
RIF1Q5UIP0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms