| HES3 | Q5TGS1 | AL121882.1-201 | ENST00000422893 | 417 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | TCEAL3-AS1-201 | ENST00000424887 | 361 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | EZH2P1-201 | ENST00000431167 | 291 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | AC241584.1-201 | ENST00000438469 | 1241 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | MTCO3P43-201 | ENST00000440974 | 771 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | OR6K5P-201 | ENST00000447050 | 945 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | AL050341.1-201 | ENST00000447743 | 313 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | AL358176.1-201 | ENST00000457477 | 357 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | LINC00430-201 | ENST00000457672 | 597 nt | TSL 3 BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | RPL23AP42-201 | ENST00000471152 | 471 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | LINC00888-204 | ENST00000487386 | 421 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | AC015468.3-201 | ENST00000518967 | 417 nt | TSL 2 BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | MTCYBP20-201 | ENST00000524239 | 1129 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | AP003730.2-201 | ENST00000526385 | 546 nt | TSL 3 BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | AC007876.1-201 | ENST00000527562 | 983 nt | TSL 1 (best) BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | OR4P1P-201 | ENST00000530808 | 1136 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | AC090695.1-201 | ENST00000561269 | 1222 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | AC061975.8-201 | ENST00000587058 | 721 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | AC106900.2-201 | ENST00000604994 | 317 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | AC079791.1-201 | ENST00000605356 | 973 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | RPL23AP88-201 | ENST00000605759 | 454 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | AC020658.4-201 | ENST00000613987 | 684 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | AL118508.4-201 | ENST00000624142 | 1176 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | LINC01002-215 | ENST00000632203 | 314 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | AC099654.7-201 | ENST00000635788 | 2127 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | AL590396.4-201 | ENST00000636779 | 956 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | ATF2-204 | ENST00000409437 | 3697 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| HES3 | Q5TGS1 | C1orf146-201 | ENST00000370373 | 871 nt | TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | SNORA51.6-201 | ENST00000384151 | 125 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | RNU6-932P-201 | ENST00000391108 | 106 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | GSTA9P-201 | ENST00000406231 | 611 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | MTATP6P11-201 | ENST00000428071 | 670 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | SAR1AP4-201 | ENST00000429225 | 591 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | Z98742.2-201 | ENST00000431564 | 187 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC005345.1-201 | ENST00000431868 | 217 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC098826.1-201 | ENST00000433943 | 471 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | LIX1L-AS1-204 | ENST00000437207 | 222 nt | TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | RPL7P12-201 | ENST00000446719 | 750 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC093422.2-201 | ENST00000452599 | 686 nt | TSL 2 BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | HMGN2P23-201 | ENST00000456759 | 269 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | KLRA1P-201 | ENST00000503499 | 986 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC011352.3-201 | ENST00000505162 | 593 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC006390.1-201 | ENST00000508068 | 283 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC087359.1-201 | ENST00000508335 | 1740 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC107222.1-201 | ENST00000510899 | 637 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC112673.1-201 | ENST00000513168 | 575 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | RNU6-27P-201 | ENST00000516146 | 107 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | HSPE1P18-201 | ENST00000517602 | 280 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | PKIA-203 | ENST00000518467 | 588 nt | APPRIS P1 TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC025281.1-201 | ENST00000567026 | 265 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | MIR5007-201 | ENST00000583098 | 95 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC002487.1-201 | ENST00000604565 | 994 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | NUTF2P8-201 | ENST00000604593 | 363 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | HSPE1P7-201 | ENST00000604681 | 321 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC008083.4-201 | ENST00000615076 | 444 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | SOBP-204 | ENST00000618129 | 1550 nt | TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | WFDC11-203 | ENST00000618797 | 561 nt | APPRIS P1 TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC007275.1-201 | ENST00000621243 | 671 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | SATB1-AS1-266 | ENST00000630271 | 813 nt | TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | FOXP2-211 | ENST00000408937 | 6443 nt | TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | CHORDC1-206 | ENST00000529987 | 1698 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | CCSAP-202 | ENST00000366686 | 4399 nt | TSL 2 BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | LIFR-201 | ENST00000263409 | 10089 nt | APPRIS P1 TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | OR4G2P-202 | ENST00000641004 | 1759 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | TUBD1-214 | ENST00000592426 | 1460 nt | APPRIS P1 TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | SNORA64-201 | ENST00000384674 | 134 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AL445183.3-201 | ENST00000414168 | 502 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC092447.6-201 | ENST00000414578 | 210 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AL354733.1-203 | ENST00000417672 | 495 nt | TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | FNDC1-IT1-201 | ENST00000419703 | 516 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | OFD1P2Y-201 | ENST00000421895 | 1149 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC246680.2-201 | ENST00000422106 | 389 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | Z96811.1-201 | ENST00000445880 | 108 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | RPL23AP20-201 | ENST00000447965 | 421 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AL589880.1-201 | ENST00000448271 | 287 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | RPS29P12-201 | ENST00000460178 | 152 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC010387.1-201 | ENST00000507526 | 487 nt | TSL 2 BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | LINC01335-201 | ENST00000507890 | 389 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC008700.1-201 | ENST00000512571 | 654 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | RNU6-1102P-201 | ENST00000516149 | 96 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | RN7SKP219-201 | ENST00000516825 | 296 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AL139317.3-202 | ENST00000555689 | 528 nt | TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | LINC02311-202 | ENST00000556819 | 477 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | LINC02126-202 | ENST00000563754 | 750 nt | TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | MTCO1P40-201 | ENST00000574371 | 625 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC011509.1-201 | ENST00000589512 | 164 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC023043.3-201 | ENST00000593113 | 385 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | RPL23AP78-201 | ENST00000599928 | 470 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AC012443.1-201 | ENST00000605605 | 231 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AL160408.5-201 | ENST00000607759 | 526 nt | TSL 4 BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | AP002826.1-201 | ENST00000608835 | 315 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | DNAH14-210 | ENST00000439375 | 13548 nt | APPRIS P1 TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | FAR1-204 | ENST00000532502 | 5820 nt | TSL 2 BASIC | 2.19 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | GTPBP8-205 | ENST00000473129 | 1518 nt | TSL 2 BASIC | 2.19 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | OR6C76-201 | ENST00000328314 | 939 nt | APPRIS P1 BASIC | 2.19 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | RNU6-1159P-201 | ENST00000362933 | 107 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | SNORD56.5-201 | ENST00000364281 | 72 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | RNU6-481P-201 | ENST00000384194 | 107 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | SNORD116-23-201 | ENST00000384645 | 92 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| HES3 | Q5TGS1 | MIR493-201 | ENST00000385254 | 89 nt | BASIC | 2.19 | □□□□□ -2.06 | | |