Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 CBX3P4-201ENST00000538909 354 ntBASIC6.24□□□□□ -1.41
RC3H1Q5TC82 AL110118.1-201ENST00000553543 400 ntBASIC6.24□□□□□ -1.41
RC3H1Q5TC82 AL133153.1-201ENST00000557756 303 ntBASIC6.24□□□□□ -1.41
RC3H1Q5TC82 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 NDUFB4P11-201ENST00000560510 395 ntBASIC6.24□□□□□ -1.41
RC3H1Q5TC82 AC022726.1-201ENST00000587475 207 ntBASIC6.24□□□□□ -1.41
RC3H1Q5TC82 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 AL138889.2-201ENST00000603883 242 ntBASIC6.24□□□□□ -1.41
RC3H1Q5TC82 AL451044.1-201ENST00000604867 238 ntBASIC6.24□□□□□ -1.41
RC3H1Q5TC82 AL138820.1-201ENST00000617901 5305 ntBASIC6.24□□□□□ -1.41
RC3H1Q5TC82 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 RNU6-81P-201ENST00000365608 104 ntBASIC6.23□□□□□ -1.41
RC3H1Q5TC82 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 TBCAP2-201ENST00000416175 326 ntBASIC6.23□□□□□ -1.41
RC3H1Q5TC82 UBE2D3P2-201ENST00000424409 445 ntBASIC6.23□□□□□ -1.41
RC3H1Q5TC82 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 AL136097.1-201ENST00000456945 913 ntBASIC6.23□□□□□ -1.41
RC3H1Q5TC82 PLGLA-201ENST00000465668 449 ntBASIC6.23□□□□□ -1.41
RC3H1Q5TC82 AC098869.1-201ENST00000481627 292 ntBASIC6.23□□□□□ -1.41
RC3H1Q5TC82 RPL23AP55-201ENST00000498163 452 ntBASIC6.23□□□□□ -1.41
RC3H1Q5TC82 AC107393.1-201ENST00000512403 346 ntBASIC6.23□□□□□ -1.41
RC3H1Q5TC82 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 RNU6-64P-201ENST00000517119 105 ntBASIC6.23□□□□□ -1.41
RC3H1Q5TC82 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 AC134698.5-201ENST00000519444 336 ntBASIC6.23□□□□□ -1.41
RC3H1Q5TC82 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 RPS29P30-201ENST00000600975 111 ntBASIC6.23□□□□□ -1.41
RC3H1Q5TC82 PSMA6P4-201ENST00000603247 718 ntBASIC6.23□□□□□ -1.41
RC3H1Q5TC82 AC002044.1-201ENST00000606707 158 ntBASIC6.23□□□□□ -1.41
RC3H1Q5TC82 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 AL450472.1-202ENST00000637286 180 ntBASIC6.23□□□□□ -1.41
RC3H1Q5TC82 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 OR56B2P-202ENST00000641377 2453 ntBASIC6.23□□□□□ -1.41
RC3H1Q5TC82 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
RC3H1Q5TC82 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 AL606537.1-201ENST00000607258 2011 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 RNA5SP447-201ENST00000363749 119 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 RN7SKP227-201ENST00000364445 330 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 Y_RNA.277-201ENST00000364754 102 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 RNA5SP479-201ENST00000364858 117 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 Y_RNA.471-201ENST00000384312 102 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 RN7SKP17-201ENST00000411242 351 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 AC096920.1-201ENST00000423991 241 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 BX276092.3-201ENST00000424182 230 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 AL353997.1-201ENST00000432936 108 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 AC000111.2-201ENST00000448200 210 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 RPS3AP46-201ENST00000448352 682 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 RPS17P2-201ENST00000461663 408 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 AC091180.1-201ENST00000462104 372 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 RN7SL197P-201ENST00000466981 299 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 AC087385.1-201ENST00000475062 312 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 RN7SL41P-201ENST00000476144 297 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 AC084198.1-201ENST00000477747 402 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 NIP7P2-201ENST00000485801 544 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms