Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NUP188Q5SRE5 RPL23AP29-201ENST00000397284 453 ntBASIC2.08□□□□□ -2.08
NUP188Q5SRE5 RNA5SP492-201ENST00000411330 114 ntBASIC2.08□□□□□ -2.08
NUP188Q5SRE5 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.08□□□□□ -2.08
NUP188Q5SRE5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.08□□□□□ -2.08
NUP188Q5SRE5 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.08□□□□□ -2.08
NUP188Q5SRE5 AC069528.1-202ENST00000482888 637 ntBASIC2.08□□□□□ -2.08
NUP188Q5SRE5 RNU6-347P-201ENST00000516658 105 ntBASIC2.08□□□□□ -2.08
NUP188Q5SRE5 RNU1-92P-201ENST00000517017 135 ntBASIC2.08□□□□□ -2.08
NUP188Q5SRE5 AP005660.1-201ENST00000522972 293 ntBASIC2.08□□□□□ -2.08
NUP188Q5SRE5 SNORD53B-201ENST00000577887 78 ntBASIC2.08□□□□□ -2.08
NUP188Q5SRE5 MIR4474-201ENST00000579189 78 ntBASIC2.08□□□□□ -2.08
NUP188Q5SRE5 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.08□□□□□ -2.08
NUP188Q5SRE5 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.08□□□□□ -2.08
NUP188Q5SRE5 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.08□□□□□ -2.08
NUP188Q5SRE5 MIR6767-201ENST00000637302 66 ntBASIC2.08□□□□□ -2.08
NUP188Q5SRE5 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
NUP188Q5SRE5 MTND2P29-201ENST00000438595 412 ntBASIC2.08□□□□□ -2.08
NUP188Q5SRE5 KATNBL1P3-201ENST00000443475 909 ntBASIC2.08□□□□□ -2.08
NUP188Q5SRE5 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.08□□□□□ -2.08
NUP188Q5SRE5 AC104472.2-201ENST00000469035 601 ntBASIC2.08□□□□□ -2.08
NUP188Q5SRE5 RN7SL274P-201ENST00000492268 272 ntBASIC2.08□□□□□ -2.08
NUP188Q5SRE5 AC013444.2-201ENST00000603317 787 ntBASIC2.08□□□□□ -2.08
NUP188Q5SRE5 AL353770.2-201ENST00000620024 78 ntBASIC2.08□□□□□ -2.08
NUP188Q5SRE5 SNORA31-201ENST00000362607 130 ntBASIC2.07□□□□□ -2.08
NUP188Q5SRE5 RNA5SP489-201ENST00000410986 109 ntBASIC2.07□□□□□ -2.08
NUP188Q5SRE5 BX510359.4-201ENST00000423750 193 ntBASIC2.07□□□□□ -2.08
NUP188Q5SRE5 RPS29P20-201ENST00000489592 171 ntBASIC2.07□□□□□ -2.08
NUP188Q5SRE5 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.07□□□□□ -2.08
NUP188Q5SRE5 MIR3935-201ENST00000583472 104 ntBASIC2.07□□□□□ -2.08
NUP188Q5SRE5 AL360085.1-201ENST00000604713 532 ntBASIC2.07□□□□□ -2.08
NUP188Q5SRE5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NUP188Q5SRE5 MAPK10-266ENST00000641066 6555 ntBASIC2.06□□□□□ -2.08
NUP188Q5SRE5 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NUP188Q5SRE5 Y_RNA.36-201ENST00000362602 112 ntBASIC2.06□□□□□ -2.08
NUP188Q5SRE5 MCTS2P-201ENST00000394552 546 ntBASIC2.06□□□□□ -2.08
NUP188Q5SRE5 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.06□□□□□ -2.08
NUP188Q5SRE5 AL513321.1-201ENST00000441175 761 ntBASIC2.06□□□□□ -2.08
NUP188Q5SRE5 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.06□□□□□ -2.08
NUP188Q5SRE5 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.06□□□□□ -2.08
NUP188Q5SRE5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.06□□□□□ -2.08
NUP188Q5SRE5 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.06□□□□□ -2.08
NUP188Q5SRE5 MIR151B-201ENST00000584249 96 ntBASIC2.06□□□□□ -2.08
NUP188Q5SRE5 SNHG22-203ENST00000617833 660 ntBASIC2.06□□□□□ -2.08
NUP188Q5SRE5 DUXAP9-208ENST00000622815 614 ntBASIC2.06□□□□□ -2.08
NUP188Q5SRE5 BX649567.1-201ENST00000642071 1134 ntBASIC2.06□□□□□ -2.08
NUP188Q5SRE5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.06□□□□□ -2.08
NUP188Q5SRE5 RNA5SP393-201ENST00000363423 117 ntBASIC2.05□□□□□ -2.08
NUP188Q5SRE5 MIR598-201ENST00000384868 97 ntBASIC2.05□□□□□ -2.08
NUP188Q5SRE5 MIR92A2-201ENST00000385299 75 ntBASIC2.05□□□□□ -2.08
NUP188Q5SRE5 RNU1-101P-201ENST00000391171 127 ntBASIC2.05□□□□□ -2.08
NUP188Q5SRE5 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
NUP188Q5SRE5 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.05□□□□□ -2.08
NUP188Q5SRE5 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.05□□□□□ -2.08
NUP188Q5SRE5 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.05□□□□□ -2.08
NUP188Q5SRE5 SEPT7P9-203ENST00000604116 343 ntBASIC2.05□□□□□ -2.08
NUP188Q5SRE5 HPVC1-201ENST00000629899 1198 ntBASIC2.05□□□□□ -2.08
NUP188Q5SRE5 MTCO1P4-201ENST00000520516 1409 ntBASIC2.05□□□□□ -2.08
NUP188Q5SRE5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
NUP188Q5SRE5 AP000567.1-201ENST00000406413 156 ntBASIC2.05□□□□□ -2.08
NUP188Q5SRE5 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.05□□□□□ -2.08
NUP188Q5SRE5 AL365400.1-201ENST00000431854 640 ntBASIC2.05□□□□□ -2.08
NUP188Q5SRE5 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NUP188Q5SRE5 AC034222.1-201ENST00000494052 532 ntBASIC2.05□□□□□ -2.08
NUP188Q5SRE5 RPL37P25-201ENST00000507308 276 ntBASIC2.05□□□□□ -2.08
NUP188Q5SRE5 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
NUP188Q5SRE5 HSPE1P11-201ENST00000339579 310 ntBASIC2.04□□□□□ -2.08
NUP188Q5SRE5 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.04□□□□□ -2.08
NUP188Q5SRE5 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.04□□□□□ -2.08
NUP188Q5SRE5 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.04□□□□□ -2.08
NUP188Q5SRE5 AC121758.2-201ENST00000553271 193 ntBASIC2.04□□□□□ -2.08
NUP188Q5SRE5 AC068714.1-201ENST00000559623 800 ntBASIC2.04□□□□□ -2.08
NUP188Q5SRE5 AC025048.6-202ENST00000627667 438 ntBASIC2.04□□□□□ -2.08
NUP188Q5SRE5 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
NUP188Q5SRE5 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.04□□□□□ -2.08
NUP188Q5SRE5 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
NUP188Q5SRE5 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
NUP188Q5SRE5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
NUP188Q5SRE5 RNA5SP189-201ENST00000364920 115 ntBASIC2.03□□□□□ -2.08
NUP188Q5SRE5 ERHP2-201ENST00000402323 299 ntBASIC2.03□□□□□ -2.08
NUP188Q5SRE5 SRIP3-201ENST00000413200 219 ntBASIC2.03□□□□□ -2.08
NUP188Q5SRE5 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.03□□□□□ -2.08
NUP188Q5SRE5 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
NUP188Q5SRE5 AC010683.1-201ENST00000473673 378 ntBASIC2.03□□□□□ -2.08
NUP188Q5SRE5 AC010625.1-201ENST00000511296 403 ntBASIC2.03□□□□□ -2.08
NUP188Q5SRE5 AC007375.1-201ENST00000554513 578 ntBASIC2.03□□□□□ -2.08
NUP188Q5SRE5 ACTR3BP3-201ENST00000565577 979 ntBASIC2.03□□□□□ -2.08
NUP188Q5SRE5 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.03□□□□□ -2.08
NUP188Q5SRE5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NUP188Q5SRE5 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.03□□□□□ -2.09
NUP188Q5SRE5 Y_RNA.205-201ENST00000364128 113 ntBASIC2.03□□□□□ -2.09
NUP188Q5SRE5 AL589994.1-201ENST00000404962 340 ntBASIC2.03□□□□□ -2.09
NUP188Q5SRE5 AL023807.1-201ENST00000407932 359 ntBASIC2.03□□□□□ -2.09
NUP188Q5SRE5 XKRYP4-201ENST00000414395 483 ntBASIC2.03□□□□□ -2.09
NUP188Q5SRE5 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.03□□□□□ -2.09
NUP188Q5SRE5 HMGB1P45-201ENST00000435986 653 ntBASIC2.03□□□□□ -2.09
NUP188Q5SRE5 MTND4LP16-201ENST00000440828 295 ntBASIC2.03□□□□□ -2.09
NUP188Q5SRE5 XKRYP5-201ENST00000449659 483 ntBASIC2.03□□□□□ -2.09
NUP188Q5SRE5 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.03□□□□□ -2.09
NUP188Q5SRE5 AC023050.1-201ENST00000498198 304 ntBASIC2.03□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms