Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 MTND5P19-201ENST00000424872 1794 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.9□□□□□ -1.62
SNAP47Q5SQN1 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.9□□□□□ -1.62
SNAP47Q5SQN1 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
SNAP47Q5SQN1 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.9□□□□□ -1.62
SNAP47Q5SQN1 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SNAP47Q5SQN1 AL365440.1-201ENST00000436135 2167 ntBASIC4.9□□□□□ -1.62
SNAP47Q5SQN1 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.9□□□□□ -1.62
SNAP47Q5SQN1 Y_RNA.31-201ENST00000362574 102 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 Y_RNA.145-201ENST00000363527 102 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 SNORA22B-201ENST00000383876 138 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 SNORA48.4-201ENST00000391089 134 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 AL391417.1-201ENST00000404100 426 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 RPS12P24-201ENST00000412619 387 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 PMCHL1-202ENST00000423102 261 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 AC079780.1-201ENST00000428259 207 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 RPL7AP49-201ENST00000429522 581 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 AL591438.1-201ENST00000433508 581 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 RPL7P28-201ENST00000437739 740 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 PRDX3P3-201ENST00000447765 522 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 AC104472.2-201ENST00000469035 601 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 RPL23AP2-201ENST00000471227 466 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 VN1R104P-201ENST00000505115 1009 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 RNU6-1016P-201ENST00000516689 94 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 RNU6-323P-201ENST00000521915 107 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 CYCSP27-201ENST00000527643 293 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 AC021006.3-201ENST00000530771 192 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 AC008033.2-201ENST00000542626 177 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 AC133104.2-201ENST00000615272 193 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 AC126323.6-202ENST00000568092 3511 ntBASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
SNAP47Q5SQN1 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 RN7SKP113-201ENST00000363891 295 ntBASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 RNU6-45P-201ENST00000384471 107 ntBASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 RNA5SP241-201ENST00000391326 114 ntBASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 FABP7P2-201ENST00000429946 379 ntBASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 RPL19P16-201ENST00000433839 588 ntBASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 AL137792.2-201ENST00000443484 235 ntBASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 AC092324.1-201ENST00000468671 324 ntBASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 SMURF2P1-201ENST00000514992 481 ntBASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 RNU6-1332P-201ENST00000516666 104 ntBASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 HIGD1AP5-201ENST00000529959 259 ntBASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 MIR15A-201ENST00000607334 83 ntBASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 AL669831.3-213ENST00000636676 183 ntBASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms