Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 RNA5SP119-201ENST00000362715 117 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 RN7SKP44-201ENST00000363602 316 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 RNU6-213P-201ENST00000384051 104 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 RNU6-837P-201ENST00000391056 108 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 RNU6-876P-201ENST00000391295 104 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 GSTA9P-201ENST00000406231 611 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 MIR1911-201ENST00000410783 80 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 SSXP9-201ENST00000417503 292 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 AL691449.1-201ENST00000426570 421 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 TIMM9P1-201ENST00000436122 256 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 MTCO3P18-201ENST00000440206 761 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 RPS4XP4-201ENST00000443195 763 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 NOTCH2P1-201ENST00000443481 624 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 C1DP4-201ENST00000455429 424 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 RPS3AP14-201ENST00000483907 780 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 RPL23AP41-201ENST00000484754 458 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 AC019235.1-201ENST00000503847 207 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 CBX3P5-201ENST00000552017 521 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 FGF7P1-201ENST00000582820 288 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 AP001429.1-201ENST00000602568 530 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 AL161756.2-201ENST00000604597 246 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 MIR98-201ENST00000606724 119 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 CASC19-280ENST00000642102 1351 ntBASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 Y_RNA.38-201ENST00000362617 102 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 Y_RNA.61-201ENST00000362835 102 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 RNY4P14-201ENST00000363656 96 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 MIR135A2-201ENST00000384854 100 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 MT-TL1-201ENST00000386347 75 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 HSPE1P12-201ENST00000412576 301 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 OR51A5P-201ENST00000415429 942 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 MTND3P17-201ENST00000416968 344 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 AC119618.1-201ENST00000434191 222 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 USP9YP8-201ENST00000441913 500 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 snoU13.24-201ENST00000458998 104 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 KCTD9P5-201ENST00000504141 1170 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 AC021146.1-201ENST00000511202 716 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 AC046134.1-201ENST00000514454 666 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 RNU6-1095P-201ENST00000516148 108 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 SNORA20.3-201ENST00000516880 132 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 RPL23AP97-201ENST00000568955 471 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 C8orf59P2-201ENST00000603441 271 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 AC245014.2-201ENST00000603689 287 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 AL592436.1-201ENST00000605135 558 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 AC246785.4-201ENST00000605374 287 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 RNA5SP108-201ENST00000605921 117 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 AC007038.2-201ENST00000608095 740 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 MIR7151-201ENST00000617477 60 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 AC099654.5-201ENST00000636479 350 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 MTND4P12-201ENST00000498999 1377 ntBASIC4.24□□□□□ -1.73
SLC44A4Q53GD3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 HSPA8P1-201ENST00000425843 1833 ntBASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 AC116667.1-201ENST00000604855 2072 ntBASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 RNU5A-8P-201ENST00000364102 114 ntBASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 RNU6-629P-201ENST00000384061 103 ntBASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 PIGFP2-201ENST00000421400 651 ntBASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 FCF1P1-201ENST00000432690 571 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms