Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 AL022238.1-201ENST00000442557 355 ntBASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 AL121769.1-201ENST00000469473 401 ntBASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 NDUFB4P2-201ENST00000509515 391 ntBASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 AC091133.4-201ENST00000511142 308 ntBASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 RNA5SP164-201ENST00000516533 110 ntBASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 RNA5SP309-201ENST00000516670 106 ntBASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 RNU6-1003P-201ENST00000517099 105 ntBASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 AL121603.1-201ENST00000553815 142 ntBASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 CYP4A43P-201ENST00000568156 121 ntBASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 TUG1_1.1-201ENST00000610654 145 ntBASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 AC092794.2-201ENST00000620933 563 ntBASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 AC010149.2-201ENST00000637608 315 ntBASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 ZNF962P-201ENST00000443465 3140 ntBASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM71Q2Q1W2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
TRIM71Q2Q1W2 PRO1804-201ENST00000623780 2050 ntBASIC4.15□□□□□ -1.74
TRIM71Q2Q1W2 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM71Q2Q1W2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM71Q2Q1W2 FRG1BP-201ENST00000278882 761 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 Y_RNA.46-201ENST00000362695 102 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 RNU6-525P-201ENST00000363685 104 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 CIR1P3-201ENST00000405137 479 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 CCNG1P1-201ENST00000406783 885 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 Y_RNA.608-201ENST00000410647 95 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 SPA17P1-201ENST00000416656 452 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 CCDC58P2-201ENST00000417131 366 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AC244505.5-201ENST00000443639 207 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 RPL21P23-201ENST00000446654 460 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 RPS3AP46-201ENST00000448352 682 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AC104308.1-201ENST00000454621 333 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 LARP1BP2-201ENST00000486594 519 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AC025554.1-201ENST00000505641 188 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 RAC1P2-201ENST00000511164 579 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AC074344.1-201ENST00000512823 224 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AC017037.2-201ENST00000513850 890 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 RNU6-314P-201ENST00000516574 104 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 OR5M7P-201ENST00000526140 972 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 ADI1P3-201ENST00000549509 470 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AL121579.1-201ENST00000555129 305 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 XIAPP1-201ENST00000603162 600 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AL365503.1-201ENST00000605247 905 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AP000860.1-201ENST00000605250 559 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AC098614.4-201ENST00000607601 462 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AL442067.2-201ENST00000614033 363 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AC104010.1-201ENST00000616889 150 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AC002550.2-201ENST00000621246 394 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AC022140.2-201ENST00000623500 188 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AL157786.1-207ENST00000627771 695 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AC099654.14-201ENST00000638599 341 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 AC090337.1-201ENST00000579651 2074 ntBASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM71Q2Q1W2 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM71Q2Q1W2 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM71Q2Q1W2 AC011460.1-201ENST00000636268 1834 ntBASIC4.14□□□□□ -1.75
TRIM71Q2Q1W2 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM71Q2Q1W2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM71Q2Q1W2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM71Q2Q1W2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM71Q2Q1W2 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM71Q2Q1W2 MIR423-201ENST00000362201 94 ntBASIC4.14□□□□□ -1.75
TRIM71Q2Q1W2 RNU6-1078P-201ENST00000364522 103 ntBASIC4.14□□□□□ -1.75
TRIM71Q2Q1W2 Y_RNA.256-201ENST00000364594 104 ntBASIC4.14□□□□□ -1.75
TRIM71Q2Q1W2 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TRIM71Q2Q1W2 Y_RNA.548-201ENST00000384656 105 ntBASIC4.14□□□□□ -1.75
TRIM71Q2Q1W2 RNU6-328P-201ENST00000390887 106 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms