Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 SRIP3-201ENST00000413200 219 ntBASIC2.5□□□□□ -2.01
HMGXB3Q12766 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.5□□□□□ -2.01
HMGXB3Q12766 AC092451.1-201ENST00000480211 153 ntBASIC2.5□□□□□ -2.01
HMGXB3Q12766 ZNF192P1-203ENST00000565888 810 ntBASIC2.5□□□□□ -2.01
HMGXB3Q12766 AC008687.2-201ENST00000597865 520 ntBASIC2.5□□□□□ -2.01
HMGXB3Q12766 AC068944.2-201ENST00000610373 403 ntBASIC2.5□□□□□ -2.01
HMGXB3Q12766 AC005156.1-201ENST00000613371 573 ntBASIC2.5□□□□□ -2.01
HMGXB3Q12766 HSPE1P11-201ENST00000339579 310 ntBASIC2.49□□□□□ -2.01
HMGXB3Q12766 AC092754.2-201ENST00000463506 460 ntBASIC2.49□□□□□ -2.01
HMGXB3Q12766 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.49□□□□□ -2.01
HMGXB3Q12766 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HMGXB3Q12766 AC123786.2-201ENST00000603459 275 ntBASIC2.49□□□□□ -2.01
HMGXB3Q12766 AC090953.1-201ENST00000604305 1092 ntBASIC2.49□□□□□ -2.01
HMGXB3Q12766 MIR6788-201ENST00000618842 66 ntBASIC2.49□□□□□ -2.01
HMGXB3Q12766 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.49□□□□□ -2.01
HMGXB3Q12766 AC103710.2-202ENST00000641454 2853 ntBASIC2.49□□□□□ -2.01
HMGXB3Q12766 AP000560.1-201ENST00000624150 1937 ntBASIC2.49□□□□□ -2.01
HMGXB3Q12766 Y_RNA.30-201ENST00000362572 97 ntBASIC2.48□□□□□ -2.01
HMGXB3Q12766 SSXP9-201ENST00000417503 292 ntBASIC2.48□□□□□ -2.01
HMGXB3Q12766 AC092832.1-201ENST00000422934 400 ntBASIC2.48□□□□□ -2.01
HMGXB3Q12766 AL031659.1-201ENST00000447075 539 ntBASIC2.48□□□□□ -2.01
HMGXB3Q12766 RPL21P39-201ENST00000463605 483 ntBASIC2.48□□□□□ -2.01
HMGXB3Q12766 AC011979.1-201ENST00000472300 483 ntBASIC2.48□□□□□ -2.01
HMGXB3Q12766 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HMGXB3Q12766 RPL21P93-201ENST00000480465 489 ntBASIC2.48□□□□□ -2.01
HMGXB3Q12766 AC233702.1-201ENST00000482905 502 ntBASIC2.48□□□□□ -2.01
HMGXB3Q12766 AC093591.1-201ENST00000491435 481 ntBASIC2.48□□□□□ -2.01
HMGXB3Q12766 RNU2-58P-201ENST00000516403 183 ntBASIC2.48□□□□□ -2.01
HMGXB3Q12766 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.48□□□□□ -2.01
HMGXB3Q12766 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.48□□□□□ -2.01
HMGXB3Q12766 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HMGXB3Q12766 AP002345.1-201ENST00000456493 928 ntBASIC2.47□□□□□ -2.01
HMGXB3Q12766 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.47□□□□□ -2.01
HMGXB3Q12766 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.47□□□□□ -2.01
HMGXB3Q12766 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HMGXB3Q12766 AC005912.1-201ENST00000495392 255 ntBASIC2.47□□□□□ -2.01
HMGXB3Q12766 MTCYBP37-201ENST00000510642 1133 ntBASIC2.47□□□□□ -2.01
HMGXB3Q12766 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.47□□□□□ -2.01
HMGXB3Q12766 AP004242.1-201ENST00000533701 349 ntBASIC2.47□□□□□ -2.01
HMGXB3Q12766 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.47□□□□□ -2.01
HMGXB3Q12766 ICE2P2-201ENST00000483823 2787 ntBASIC2.47□□□□□ -2.01
HMGXB3Q12766 Z85995.1-201ENST00000415547 335 ntBASIC2.47□□□□□ -2.01
HMGXB3Q12766 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.47□□□□□ -2.01
HMGXB3Q12766 MTND4LP13-201ENST00000425022 298 ntBASIC2.47□□□□□ -2.01
HMGXB3Q12766 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.47□□□□□ -2.01
HMGXB3Q12766 HMGB3P21-201ENST00000452483 547 ntBASIC2.47□□□□□ -2.01
HMGXB3Q12766 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.47□□□□□ -2.01
HMGXB3Q12766 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.47□□□□□ -2.01
HMGXB3Q12766 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC2.47□□□□□ -2.01
HMGXB3Q12766 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
HMGXB3Q12766 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
HMGXB3Q12766 RNU2-37P-201ENST00000410695 177 ntBASIC2.46□□□□□ -2.02
HMGXB3Q12766 ELOCP10-201ENST00000440624 327 ntBASIC2.46□□□□□ -2.02
HMGXB3Q12766 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.46□□□□□ -2.02
HMGXB3Q12766 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.46□□□□□ -2.02
HMGXB3Q12766 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.46□□□□□ -2.02
HMGXB3Q12766 AC008885.2-201ENST00000509506 930 ntBASIC2.46□□□□□ -2.02
HMGXB3Q12766 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.46□□□□□ -2.02
HMGXB3Q12766 ELOCP34-201ENST00000604436 327 ntBASIC2.46□□□□□ -2.02
HMGXB3Q12766 AC002487.1-201ENST00000604565 994 ntBASIC2.46□□□□□ -2.02
HMGXB3Q12766 AC008121.3-201ENST00000618726 433 ntBASIC2.46□□□□□ -2.02
HMGXB3Q12766 AC090617.7-201ENST00000623952 126 ntBASIC2.46□□□□□ -2.02
HMGXB3Q12766 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HMGXB3Q12766 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
HMGXB3Q12766 Y_RNA.205-201ENST00000364128 113 ntBASIC2.45□□□□□ -2.02
HMGXB3Q12766 U3.15-201ENST00000365398 212 ntBASIC2.45□□□□□ -2.02
HMGXB3Q12766 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.45□□□□□ -2.02
HMGXB3Q12766 AL445669.1-201ENST00000426743 755 ntBASIC2.45□□□□□ -2.02
HMGXB3Q12766 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.45□□□□□ -2.02
HMGXB3Q12766 COX6CP12-201ENST00000446748 202 ntBASIC2.45□□□□□ -2.02
HMGXB3Q12766 HMGN2P18-201ENST00000450680 270 ntBASIC2.45□□□□□ -2.02
HMGXB3Q12766 ARPC3P2-201ENST00000457786 533 ntBASIC2.45□□□□□ -2.02
HMGXB3Q12766 COX6CP14-201ENST00000469580 174 ntBASIC2.45□□□□□ -2.02
HMGXB3Q12766 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.45□□□□□ -2.02
HMGXB3Q12766 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.45□□□□□ -2.02
HMGXB3Q12766 AF131216.2-201ENST00000512316 564 ntBASIC2.45□□□□□ -2.02
HMGXB3Q12766 AC023813.2-201ENST00000564321 469 ntBASIC2.45□□□□□ -2.02
HMGXB3Q12766 AC067838.1-201ENST00000606064 577 ntBASIC2.45□□□□□ -2.02
HMGXB3Q12766 SNHG22-203ENST00000617833 660 ntBASIC2.45□□□□□ -2.02
HMGXB3Q12766 FO624990.1-201ENST00000636373 85 ntBASIC2.45□□□□□ -2.02
HMGXB3Q12766 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.45□□□□□ -2.02
HMGXB3Q12766 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
HMGXB3Q12766 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.44□□□□□ -2.02
HMGXB3Q12766 SNORA40.6-201ENST00000391153 128 ntBASIC2.44□□□□□ -2.02
HMGXB3Q12766 TPMTP3-201ENST00000411928 735 ntBASIC2.44□□□□□ -2.02
HMGXB3Q12766 AC093084.1-201ENST00000424233 687 ntBASIC2.44□□□□□ -2.02
HMGXB3Q12766 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.44□□□□□ -2.02
HMGXB3Q12766 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.44□□□□□ -2.02
HMGXB3Q12766 RPS3AP22-201ENST00000488297 769 ntBASIC2.44□□□□□ -2.02
HMGXB3Q12766 AC012170.1-201ENST00000495139 359 ntBASIC2.44□□□□□ -2.02
HMGXB3Q12766 RNU6-56P-201ENST00000516986 93 ntBASIC2.44□□□□□ -2.02
HMGXB3Q12766 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.44□□□□□ -2.02
HMGXB3Q12766 CFTRP2-201ENST00000634304 199 ntBASIC2.44□□□□□ -2.02
HMGXB3Q12766 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.43□□□□□ -2.02
HMGXB3Q12766 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGXB3Q12766 CKS1BP5-201ENST00000434172 273 ntBASIC2.43□□□□□ -2.02
HMGXB3Q12766 RAB9AP5-201ENST00000437794 597 ntBASIC2.43□□□□□ -2.02
HMGXB3Q12766 RAB9AP2-201ENST00000443911 597 ntBASIC2.43□□□□□ -2.02
HMGXB3Q12766 CASP3P1-201ENST00000446037 609 ntBASIC2.43□□□□□ -2.02
HMGXB3Q12766 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms