Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC099522.1-202ENST00000514718 367 ntBASIC4.85□□□□□ -1.63
SSRP1Q08945 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.85□□□□□ -1.63
SSRP1Q08945 AC134698.5-201ENST00000519444 336 ntBASIC4.85□□□□□ -1.63
SSRP1Q08945 SUB1P1-201ENST00000524415 382 ntBASIC4.85□□□□□ -1.63
SSRP1Q08945 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSRP1Q08945 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSRP1Q08945 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.85□□□□□ -1.63
SSRP1Q08945 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.85□□□□□ -1.63
SSRP1Q08945 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.85□□□□□ -1.63
SSRP1Q08945 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.85□□□□□ -1.63
SSRP1Q08945 MIR3138-201ENST00000585238 82 ntBASIC4.85□□□□□ -1.63
SSRP1Q08945 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.85□□□□□ -1.63
SSRP1Q08945 AC010525.2-201ENST00000590920 195 ntBASIC4.85□□□□□ -1.63
SSRP1Q08945 MIR3653-201ENST00000625572 110 ntBASIC4.85□□□□□ -1.63
SSRP1Q08945 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.85□□□□□ -1.63
SSRP1Q08945 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.85□□□□□ -1.63
SSRP1Q08945 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSRP1Q08945 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSRP1Q08945 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSRP1Q08945 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SSRP1Q08945 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSRP1Q08945 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSRP1Q08945 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSRP1Q08945 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSRP1Q08945 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSRP1Q08945 OR4G1P-203ENST00000641984 1631 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.84□□□□□ -1.63
SSRP1Q08945 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSRP1Q08945 RNA5SP52-201ENST00000362448 134 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 RNA5SP388-201ENST00000362584 119 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 RNU6-1074P-201ENST00000383995 104 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SSRP1Q08945 SNORD37.1-201ENST00000390968 65 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 AC110754.1-201ENST00000399740 601 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.84□□□□□ -1.63
SSRP1Q08945 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.84□□□□□ -1.63
SSRP1Q08945 AC245054.1-201ENST00000420944 258 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 AC091390.1-201ENST00000433904 331 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 GAPDHP27-201ENST00000447427 1020 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 MTND1P18-201ENST00000448191 573 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.84□□□□□ -1.63
SSRP1Q08945 MTND1P11-201ENST00000456661 876 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 RPL7L1P8-201ENST00000469911 741 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 UQCRHP4-201ENST00000471686 272 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSRP1Q08945 AC017037.1-201ENST00000508460 471 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 AC010486.1-201ENST00000511793 424 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 MTCO1P35-201ENST00000515270 228 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 RN7SKP219-201ENST00000516825 296 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 RNA5SP503-201ENST00000517047 117 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 AP004371.1-201ENST00000525240 214 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 OR5B19P-201ENST00000531766 928 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.84□□□□□ -1.63
SSRP1Q08945 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.84□□□□□ -1.63
SSRP1Q08945 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.84□□□□□ -1.63
SSRP1Q08945 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.84□□□□□ -1.63
SSRP1Q08945 AL138976.2-201ENST00000563989 694 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 AC022655.2-201ENST00000577280 318 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.84□□□□□ -1.63
SSRP1Q08945 AC018638.8-201ENST00000588755 281 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.84□□□□□ -1.63
SSRP1Q08945 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.84□□□□□ -1.63
SSRP1Q08945 AL022099.1-201ENST00000604551 712 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 AP001486.3-201ENST00000615334 372 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.84□□□□□ -1.63
SSRP1Q08945 AC079684.1-201ENST00000621405 437 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 U6.114-201ENST00000636407 96 ntBASIC4.84□□□□□ -1.63
SSRP1Q08945 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSRP1Q08945 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.84□□□□□ -1.64
SSRP1Q08945 AC074029.4-201ENST00000624796 1859 ntBASIC4.83□□□□□ -1.64
SSRP1Q08945 AL136964.1-201ENST00000622038 2990 ntBASIC4.83□□□□□ -1.64
SSRP1Q08945 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.83□□□□□ -1.64
SSRP1Q08945 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSRP1Q08945 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSRP1Q08945 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSRP1Q08945 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SSRP1Q08945 MIR383-201ENST00000362257 73 ntBASIC4.83□□□□□ -1.64
SSRP1Q08945 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSRP1Q08945 TXNP7-201ENST00000406296 293 ntBASIC4.83□□□□□ -1.64
SSRP1Q08945 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.83□□□□□ -1.64
SSRP1Q08945 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.83□□□□□ -1.64
SSRP1Q08945 C4BPAP2-201ENST00000428434 478 ntBASIC4.83□□□□□ -1.64
SSRP1Q08945 CYCSP43-201ENST00000438233 310 ntBASIC4.83□□□□□ -1.64
SSRP1Q08945 MTND4LP16-201ENST00000440828 295 ntBASIC4.83□□□□□ -1.64
SSRP1Q08945 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSRP1Q08945 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.83□□□□□ -1.64
SSRP1Q08945 AC006517.1-201ENST00000480485 328 ntBASIC4.83□□□□□ -1.64
SSRP1Q08945 AC105137.1-201ENST00000484355 562 ntBASIC4.83□□□□□ -1.64
SSRP1Q08945 RNA5SP360-201ENST00000516555 118 ntBASIC4.83□□□□□ -1.64
SSRP1Q08945 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.83□□□□□ -1.64
SSRP1Q08945 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.83□□□□□ -1.64
SSRP1Q08945 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.83□□□□□ -1.64
SSRP1Q08945 AC093012.1-202ENST00000549403 582 ntBASIC4.83□□□□□ -1.64
SSRP1Q08945 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.83□□□□□ -1.64
SSRP1Q08945 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.83□□□□□ -1.64
SSRP1Q08945 AC024619.4-201ENST00000580924 316 ntBASIC4.83□□□□□ -1.64
SSRP1Q08945 AC011712.1-201ENST00000588959 234 ntBASIC4.83□□□□□ -1.64
SSRP1Q08945 ARF4P1-201ENST00000605447 541 ntBASIC4.83□□□□□ -1.64
SSRP1Q08945 uc_338.11-201ENST00000619132 160 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms