Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.12□□□□□ -1.91
SCN1BQ07699 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCN1BQ07699 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.12□□□□□ -1.91
SCN1BQ07699 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SCN1BQ07699 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCN1BQ07699 Y_RNA.97-201ENST00000363094 102 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 RNU5A-8P-201ENST00000364102 114 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 AC068538.1-201ENST00000376856 336 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 SNORA11B-201ENST00000408175 129 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 U3.39-201ENST00000408569 239 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 Y_RNA.625-201ENST00000411256 107 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 AC078974.1-201ENST00000411597 223 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 RAP1BP1-201ENST00000412709 553 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN1BQ07699 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN1BQ07699 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN1BQ07699 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN1BQ07699 AC092047.1-201ENST00000424997 240 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 AL593851.1-201ENST00000426171 157 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN1BQ07699 RSL24D1P6-201ENST00000426934 401 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 DPPA2P1-201ENST00000428060 556 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.12□□□□□ -1.91
SCN1BQ07699 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.12□□□□□ -1.91
SCN1BQ07699 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.12□□□□□ -1.91
SCN1BQ07699 AC009969.1-201ENST00000438726 172 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 MTND5P2-201ENST00000442927 1142 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 MTATP6P30-201ENST00000443540 664 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN1BQ07699 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.12□□□□□ -1.91
SCN1BQ07699 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN1BQ07699 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.12□□□□□ -1.91
SCN1BQ07699 RN7SL283P-201ENST00000489055 303 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SCN1BQ07699 NPM1P41-201ENST00000512920 831 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.12□□□□□ -1.91
SCN1BQ07699 RNU6-64P-201ENST00000517119 105 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN1BQ07699 AC007115.1-201ENST00000546853 234 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.12□□□□□ -1.91
SCN1BQ07699 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN1BQ07699 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN1BQ07699 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.12□□□□□ -1.91
SCN1BQ07699 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN1BQ07699 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN1BQ07699 U73023.1-201ENST00000603134 700 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 PRELID3BP8-201ENST00000604148 295 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.12□□□□□ -1.91
SCN1BQ07699 AL354798.1-201ENST00000622505 329 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 AL732618.1-201ENST00000623251 301 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 AL356266.1-201ENST00000623311 483 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.12□□□□□ -1.91
SCN1BQ07699 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCN1BQ07699 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.12□□□□□ -1.91
SCN1BQ07699 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.12□□□□□ -1.91
SCN1BQ07699 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SCN1BQ07699 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SCN1BQ07699 ZNF833P-201ENST00000424938 1494 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 CR383658.2-201ENST00000547576 1525 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 Y_RNA.46-201ENST00000362695 102 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 RNA5SP139-201ENST00000364340 117 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.11□□□□□ -1.91
SCN1BQ07699 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.11□□□□□ -1.91
SCN1BQ07699 RNU6-217P-201ENST00000384164 104 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 RPL32P23-201ENST00000397237 405 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.11□□□□□ -1.91
SCN1BQ07699 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
SCN1BQ07699 ZNF863P-201ENST00000426746 417 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.11□□□□□ -1.91
SCN1BQ07699 RPS29P7-201ENST00000439662 171 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 AC020550.1-201ENST00000447385 163 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.11□□□□□ -1.91
SCN1BQ07699 CENPBD1P1-201ENST00000464061 469 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 RPL23AP67-201ENST00000465341 474 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 RN7SL385P-201ENST00000468873 276 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 RPL23AP41-201ENST00000484754 458 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SCN1BQ07699 AC138853.1-201ENST00000503549 823 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.11□□□□□ -1.91
SCN1BQ07699 MTND5P13-201ENST00000513046 1079 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.11□□□□□ -1.91
SCN1BQ07699 DEFB108A-201ENST00000530110 222 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.11□□□□□ -1.91
SCN1BQ07699 AC007224.1-201ENST00000564410 144 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.11□□□□□ -1.91
SCN1BQ07699 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.11□□□□□ -1.91
SCN1BQ07699 AC008751.2-201ENST00000597885 980 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 DPPA3P3-201ENST00000603842 430 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 AC103710.1-201ENST00000610003 901 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 AC087683.2-201ENST00000611384 326 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.11□□□□□ -1.91
SCN1BQ07699 AP002791.1-201ENST00000623291 381 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 RNA5SP196-201ENST00000625967 102 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 AC008993.2-201ENST00000631744 806 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.11□□□□□ -1.91
SCN1BQ07699 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
SCN1BQ07699 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.11□□□□□ -1.91
SCN1BQ07699 AC022336.2-201ENST00000568966 2538 ntBASIC3.11□□□□□ -1.91
SCN1BQ07699 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SCN1BQ07699 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms