Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC140725.3-201ENST00000616193 880 ntBASIC2.71□□□□□ -1.98
CDH6P55285 AC253576.2-201ENST00000618815 580 ntBASIC2.71□□□□□ -1.98
CDH6P55285 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH6P55285 MIR1322-201ENST00000638013 71 ntBASIC2.71□□□□□ -1.98
CDH6P55285 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDH6P55285 AC010680.1-201ENST00000590024 3590 ntBASIC2.71□□□□□ -1.98
CDH6P55285 AC107982.1-201ENST00000507171 1300 ntBASIC2.7□□□□□ -1.98
CDH6P55285 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CDH6P55285 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CDH6P55285 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDH6P55285 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDH6P55285 RNU6-859P-201ENST00000362728 107 ntBASIC2.7□□□□□ -1.98
CDH6P55285 RNU1-100P-201ENST00000365255 165 ntBASIC2.7□□□□□ -1.98
CDH6P55285 RPS3AP24-201ENST00000407896 734 ntBASIC2.7□□□□□ -1.98
CDH6P55285 AL450338.1-201ENST00000407987 512 ntBASIC2.7□□□□□ -1.98
CDH6P55285 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.7□□□□□ -1.98
CDH6P55285 AL592310.1-201ENST00000414330 671 ntBASIC2.7□□□□□ -1.98
CDH6P55285 RPLP0P7-201ENST00000416050 667 ntBASIC2.7□□□□□ -1.98
CDH6P55285 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.7□□□□□ -1.98
CDH6P55285 AC090774.1-201ENST00000435925 246 ntBASIC2.7□□□□□ -1.98
CDH6P55285 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.7□□□□□ -1.98
CDH6P55285 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.7□□□□□ -1.98
CDH6P55285 AC096576.1-201ENST00000489014 359 ntBASIC2.7□□□□□ -1.98
CDH6P55285 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDH6P55285 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH6P55285 AC034159.1-201ENST00000513885 583 ntBASIC2.7□□□□□ -1.98
CDH6P55285 NDUFS5P6-201ENST00000529136 295 ntBASIC2.7□□□□□ -1.98
CDH6P55285 AP003066.2-201ENST00000529375 555 ntBASIC2.7□□□□□ -1.98
CDH6P55285 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH6P55285 AC123904.3-201ENST00000547218 814 ntBASIC2.7□□□□□ -1.98
CDH6P55285 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.7□□□□□ -1.98
CDH6P55285 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CDH6P55285 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.7□□□□□ -1.98
CDH6P55285 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH6P55285 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH6P55285 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH6P55285 VN1R92P-201ENST00000598511 928 ntBASIC2.7□□□□□ -1.98
CDH6P55285 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CDH6P55285 AL161629.2-201ENST00000615347 275 ntBASIC2.7□□□□□ -1.98
CDH6P55285 AC025588.4-201ENST00000615802 908 ntBASIC2.7□□□□□ -1.98
CDH6P55285 AC084824.4-201ENST00000620106 731 ntBASIC2.7□□□□□ -1.98
CDH6P55285 AC120349.2-201ENST00000625002 298 ntBASIC2.7□□□□□ -1.98
CDH6P55285 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.7□□□□□ -1.98
CDH6P55285 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.7□□□□□ -1.98
CDH6P55285 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDH6P55285 AC012321.1-201ENST00000561622 1588 ntBASIC2.7□□□□□ -1.98
CDH6P55285 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CDH6P55285 AC026241.1-201ENST00000517873 2142 ntBASIC2.69□□□□□ -1.98
CDH6P55285 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH6P55285 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
CDH6P55285 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDH6P55285 RNU6-198P-201ENST00000384258 104 ntBASIC2.69□□□□□ -1.98
CDH6P55285 AL356057.2-201ENST00000403318 432 ntBASIC2.69□□□□□ -1.98
CDH6P55285 AL139095.1-201ENST00000404326 391 ntBASIC2.69□□□□□ -1.98
CDH6P55285 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH6P55285 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH6P55285 AL356867.1-201ENST00000429623 299 ntBASIC2.69□□□□□ -1.98
CDH6P55285 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH6P55285 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH6P55285 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH6P55285 AL831737.1-201ENST00000441288 271 ntBASIC2.69□□□□□ -1.98
CDH6P55285 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH6P55285 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH6P55285 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH6P55285 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH6P55285 AC234775.1-201ENST00000454247 670 ntBASIC2.69□□□□□ -1.98
CDH6P55285 RNU6-420P-201ENST00000458780 107 ntBASIC2.69□□□□□ -1.98
CDH6P55285 SNORD109B-201ENST00000458961 67 ntBASIC2.69□□□□□ -1.98
CDH6P55285 SNORD109A-201ENST00000459128 67 ntBASIC2.69□□□□□ -1.98
CDH6P55285 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH6P55285 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH6P55285 AC096725.1-201ENST00000514266 313 ntBASIC2.69□□□□□ -1.98
CDH6P55285 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH6P55285 AC022861.1-201ENST00000522981 663 ntBASIC2.69□□□□□ -1.98
CDH6P55285 DEFB130C-202ENST00000530001 230 ntBASIC2.69□□□□□ -1.98
CDH6P55285 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.69□□□□□ -1.98
CDH6P55285 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH6P55285 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDH6P55285 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH6P55285 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.69□□□□□ -1.98
CDH6P55285 AP002802.2-201ENST00000605877 235 ntBASIC2.69□□□□□ -1.98
CDH6P55285 AL596245.1-201ENST00000618994 362 ntBASIC2.69□□□□□ -1.98
CDH6P55285 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CDH6P55285 AC068880.5-201ENST00000624331 290 ntBASIC2.69□□□□□ -1.98
CDH6P55285 AC110079.1-202ENST00000635213 138 ntBASIC2.69□□□□□ -1.98
CDH6P55285 AP000526.1-201ENST00000603308 1388 ntBASIC2.69□□□□□ -1.98
CDH6P55285 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH6P55285 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CDH6P55285 SNORD62.1-201ENST00000362541 86 ntBASIC2.68□□□□□ -1.98
CDH6P55285 RNU5A-1-201ENST00000362698 116 ntBASIC2.68□□□□□ -1.98
CDH6P55285 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.68□□□□□ -1.98
CDH6P55285 AL096701.2-201ENST00000416920 238 ntBASIC2.68□□□□□ -1.98
CDH6P55285 AC019097.1-201ENST00000424783 735 ntBASIC2.68□□□□□ -1.98
CDH6P55285 AC063976.3-201ENST00000426849 329 ntBASIC2.68□□□□□ -1.98
CDH6P55285 AL590383.1-201ENST00000428602 75 ntBASIC2.68□□□□□ -1.98
CDH6P55285 GTF2IP7-202ENST00000436677 309 ntBASIC2.68□□□□□ -1.98
CDH6P55285 USP9YP22-201ENST00000438971 294 ntBASIC2.68□□□□□ -1.98
CDH6P55285 AC092902.1-201ENST00000486999 259 ntBASIC2.68□□□□□ -1.98
CDH6P55285 SRIP1-201ENST00000489235 288 ntBASIC2.68□□□□□ -1.98
CDH6P55285 TMEM251P1-201ENST00000503717 318 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms