Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.79□□□□□ -1.64
MRE11P49959 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.79□□□□□ -1.64
MRE11P49959 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.79□□□□□ -1.64
MRE11P49959 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.79□□□□□ -1.64
MRE11P49959 IPO8P1-201ENST00000455509 3109 ntBASIC4.79□□□□□ -1.64
MRE11P49959 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MRE11P49959 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MRE11P49959 XPOTP1-201ENST00000443317 2398 ntBASIC4.78□□□□□ -1.64
MRE11P49959 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.78□□□□□ -1.64
MRE11P49959 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
MRE11P49959 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MRE11P49959 NMD3P1-201ENST00000439704 1488 ntBASIC4.78□□□□□ -1.64
MRE11P49959 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MRE11P49959 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
MRE11P49959 RNU5E-1-201ENST00000362477 120 ntBASIC4.78□□□□□ -1.64
MRE11P49959 RNU6-451P-201ENST00000362921 107 ntBASIC4.78□□□□□ -1.64
MRE11P49959 RNU6-853P-201ENST00000364306 107 ntBASIC4.78□□□□□ -1.64
MRE11P49959 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
MRE11P49959 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.78□□□□□ -1.64
MRE11P49959 RPL30P2-201ENST00000414021 291 ntBASIC4.78□□□□□ -1.64
MRE11P49959 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.78□□□□□ -1.64
MRE11P49959 AL035410.1-201ENST00000427409 427 ntBASIC4.78□□□□□ -1.64
MRE11P49959 AL117339.2-201ENST00000430475 180 ntBASIC4.78□□□□□ -1.64
MRE11P49959 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.78□□□□□ -1.64
MRE11P49959 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.78□□□□□ -1.64
MRE11P49959 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.78□□□□□ -1.64
MRE11P49959 AL136380.1-201ENST00000447970 162 ntBASIC4.78□□□□□ -1.64
MRE11P49959 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.78□□□□□ -1.64
MRE11P49959 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.78□□□□□ -1.64
MRE11P49959 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.78□□□□□ -1.64
MRE11P49959 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.78□□□□□ -1.64
MRE11P49959 RNU6-1153P-201ENST00000516760 105 ntBASIC4.78□□□□□ -1.64
MRE11P49959 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.78□□□□□ -1.64
MRE11P49959 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.78□□□□□ -1.64
MRE11P49959 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.78□□□□□ -1.64
MRE11P49959 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.78□□□□□ -1.64
MRE11P49959 AC123904.2-201ENST00000548059 300 ntBASIC4.78□□□□□ -1.64
MRE11P49959 GNRHR2P1-201ENST00000555315 631 ntBASIC4.78□□□□□ -1.64
MRE11P49959 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.78□□□□□ -1.64
MRE11P49959 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.78□□□□□ -1.64
MRE11P49959 AC106782.4-201ENST00000568264 210 ntBASIC4.78□□□□□ -1.64
MRE11P49959 RPS3AP23-202ENST00000574601 686 ntBASIC4.78□□□□□ -1.64
MRE11P49959 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.78□□□□□ -1.64
MRE11P49959 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.78□□□□□ -1.64
MRE11P49959 RMST_3.1-201ENST00000611651 109 ntBASIC4.78□□□□□ -1.64
MRE11P49959 YWHAEP7-203ENST00000622054 312 ntBASIC4.78□□□□□ -1.64
MRE11P49959 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.78□□□□□ -1.64
MRE11P49959 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MRE11P49959 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.78□□□□□ -1.64
MRE11P49959 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.78□□□□□ -1.64
MRE11P49959 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
MRE11P49959 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
MRE11P49959 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
MRE11P49959 AC008725.1-201ENST00000605123 2263 ntBASIC4.77□□□□□ -1.65
MRE11P49959 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.77□□□□□ -1.65
MRE11P49959 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
MRE11P49959 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
MRE11P49959 RNA5SP119-201ENST00000362715 117 ntBASIC4.77□□□□□ -1.65
MRE11P49959 Y_RNA.72-201ENST00000362894 103 ntBASIC4.77□□□□□ -1.65
MRE11P49959 Y_RNA.381-201ENST00000365666 102 ntBASIC4.77□□□□□ -1.65
MRE11P49959 RPS4XP8-201ENST00000402039 771 ntBASIC4.77□□□□□ -1.65
MRE11P49959 AL356057.2-201ENST00000403318 432 ntBASIC4.77□□□□□ -1.65
MRE11P49959 BTBD10P2-201ENST00000404779 676 ntBASIC4.77□□□□□ -1.65
MRE11P49959 MIR1179-201ENST00000408703 91 ntBASIC4.77□□□□□ -1.65
MRE11P49959 RNA5SP118-201ENST00000410385 109 ntBASIC4.77□□□□□ -1.65
MRE11P49959 EEF1A1P40-201ENST00000412883 573 ntBASIC4.77□□□□□ -1.65
MRE11P49959 MTATP6P18-201ENST00000417994 673 ntBASIC4.77□□□□□ -1.65
MRE11P49959 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.77□□□□□ -1.65
MRE11P49959 EIF1P3-201ENST00000423841 334 ntBASIC4.77□□□□□ -1.65
MRE11P49959 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.77□□□□□ -1.65
MRE11P49959 SEPT14P3-201ENST00000439401 183 ntBASIC4.77□□□□□ -1.65
MRE11P49959 AL732372.2-207ENST00000445840 183 ntBASIC4.77□□□□□ -1.65
MRE11P49959 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.77□□□□□ -1.65
MRE11P49959 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.77□□□□□ -1.65
MRE11P49959 SEPT14P2-201ENST00000453405 183 ntBASIC4.77□□□□□ -1.65
MRE11P49959 RPS20P32-201ENST00000456044 356 ntBASIC4.77□□□□□ -1.65
MRE11P49959 RPS20P20-201ENST00000460498 340 ntBASIC4.77□□□□□ -1.65
MRE11P49959 PABPC1P3-201ENST00000469174 459 ntBASIC4.77□□□□□ -1.65
MRE11P49959 AC083798.1-201ENST00000472671 131 ntBASIC4.77□□□□□ -1.65
MRE11P49959 AP000893.1-201ENST00000474462 794 ntBASIC4.77□□□□□ -1.65
MRE11P49959 RN7SL810P-201ENST00000493031 276 ntBASIC4.77□□□□□ -1.65
MRE11P49959 SEPT14P4-201ENST00000513445 186 ntBASIC4.77□□□□□ -1.65
MRE11P49959 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.77□□□□□ -1.65
MRE11P49959 FO082796.1-201ENST00000523795 183 ntBASIC4.77□□□□□ -1.65
MRE11P49959 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.77□□□□□ -1.65
MRE11P49959 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.77□□□□□ -1.65
MRE11P49959 MIR3167-201ENST00000579623 85 ntBASIC4.77□□□□□ -1.65
MRE11P49959 AC244505.7-201ENST00000599675 272 ntBASIC4.77□□□□□ -1.65
MRE11P49959 AL136363.1-201ENST00000605349 337 ntBASIC4.77□□□□□ -1.65
MRE11P49959 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.77□□□□□ -1.65
MRE11P49959 AC019176.2-201ENST00000611579 315 ntBASIC4.77□□□□□ -1.65
MRE11P49959 AC012442.3-202ENST00000636742 206 ntBASIC4.77□□□□□ -1.65
MRE11P49959 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
MRE11P49959 EIF2AP4-201ENST00000424793 1781 ntBASIC4.76□□□□□ -1.65
MRE11P49959 RNA5SP366-201ENST00000365454 123 ntBASIC4.76□□□□□ -1.65
MRE11P49959 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
MRE11P49959 AC068050.1-201ENST00000394891 380 ntBASIC4.76□□□□□ -1.65
MRE11P49959 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
MRE11P49959 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.76□□□□□ -1.65
MRE11P49959 AC007390.1-201ENST00000415722 356 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms