Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
CENPFP49454 MTCYBP45-201ENST00000435243 565 ntBASIC1.52□□□□□ -2.17
CENPFP49454 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.52□□□□□ -2.17
CENPFP49454 AC084364.2-201ENST00000546924 395 ntBASIC1.52□□□□□ -2.17
CENPFP49454 MIR6078-201ENST00000611069 100 ntBASIC1.52□□□□□ -2.17
CENPFP49454 AC006329.2-201ENST00000611491 394 ntBASIC1.52□□□□□ -2.17
CENPFP49454 AC018630.2-201ENST00000534866 2403 ntBASIC1.52□□□□□ -2.17
CENPFP49454 U3.15-201ENST00000365398 212 ntBASIC1.52□□□□□ -2.17
CENPFP49454 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
CENPFP49454 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CENPFP49454 RSL24D1P2-201ENST00000445584 366 ntBASIC1.52□□□□□ -2.17
CENPFP49454 AC092902.1-201ENST00000486999 259 ntBASIC1.52□□□□□ -2.17
CENPFP49454 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.52□□□□□ -2.17
CENPFP49454 AC007375.1-201ENST00000554513 578 ntBASIC1.52□□□□□ -2.17
CENPFP49454 SUB1P4-201ENST00000566062 339 ntBASIC1.52□□□□□ -2.17
CENPFP49454 AL049779.4-201ENST00000604500 156 ntBASIC1.52□□□□□ -2.17
CENPFP49454 AC090970.3-201ENST00000612566 866 ntBASIC1.52□□□□□ -2.17
CENPFP49454 AC098657.3-201ENST00000620434 263 ntBASIC1.52□□□□□ -2.17
CENPFP49454 AL121594.5-201ENST00000631724 573 ntBASIC1.52□□□□□ -2.17
CENPFP49454 MKKS-204ENST00000639674 192 ntBASIC1.52□□□□□ -2.17
CENPFP49454 SNORA40.6-201ENST00000391153 128 ntBASIC1.51□□□□□ -2.17
CENPFP49454 AC092638.1-201ENST00000411966 1275 ntBASIC1.51□□□□□ -2.17
CENPFP49454 Z85995.1-201ENST00000415547 335 ntBASIC1.51□□□□□ -2.17
CENPFP49454 AC098799.2-201ENST00000509466 868 ntBASIC1.51□□□□□ -2.17
CENPFP49454 AL590099.1-201ENST00000615276 138 ntBASIC1.51□□□□□ -2.17
CENPFP49454 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.51□□□□□ -2.17
CENPFP49454 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CENPFP49454 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CENPFP49454 U8.1-201ENST00000362843 134 ntBASIC1.51□□□□□ -2.17
CENPFP49454 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.51□□□□□ -2.17
CENPFP49454 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.51□□□□□ -2.17
CENPFP49454 FABP5P3-201ENST00000437960 408 ntBASIC1.51□□□□□ -2.17
CENPFP49454 AC104307.1-201ENST00000616142 196 ntBASIC1.51□□□□□ -2.17
CENPFP49454 MIR222-201ENST00000384992 110 ntBASIC1.51□□□□□ -2.17
CENPFP49454 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.51□□□□□ -2.17
CENPFP49454 AL078601.1-201ENST00000444542 271 ntBASIC1.51□□□□□ -2.17
CENPFP49454 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.51□□□□□ -2.17
CENPFP49454 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.51□□□□□ -2.17
CENPFP49454 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.51□□□□□ -2.17
CENPFP49454 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.5□□□□□ -2.17
CENPFP49454 Y_RNA.471-201ENST00000384312 102 ntBASIC1.5□□□□□ -2.17
CENPFP49454 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.5□□□□□ -2.17
CENPFP49454 EBAG9P1-201ENST00000418955 543 ntBASIC1.5□□□□□ -2.17
CENPFP49454 AL445305.1-201ENST00000432577 575 ntBASIC1.5□□□□□ -2.17
CENPFP49454 AL121917.1-203ENST00000605534 577 ntBASIC1.5□□□□□ -2.17
CENPFP49454 AC097504.2-201ENST00000608088 454 ntBASIC1.5□□□□□ -2.17
CENPFP49454 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.5□□□□□ -2.17
CENPFP49454 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.5□□□□□ -2.17
CENPFP49454 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CENPFP49454 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.5□□□□□ -2.17
CENPFP49454 AL031659.1-201ENST00000447075 539 ntBASIC1.5□□□□□ -2.17
CENPFP49454 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.5□□□□□ -2.17
CENPFP49454 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
CENPFP49454 AP001486.2-201ENST00000561652 5113 ntBASIC1.5□□□□□ -2.17
CENPFP49454 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CENPFP49454 U3.40-201ENST00000408706 208 ntBASIC1.49□□□□□ -2.17
CENPFP49454 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.49□□□□□ -2.17
CENPFP49454 AP003033.1-201ENST00000527244 415 ntBASIC1.49□□□□□ -2.17
CENPFP49454 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.49□□□□□ -2.17
CENPFP49454 uc_338.12-201ENST00000616344 181 ntBASIC1.49□□□□□ -2.17
CENPFP49454 MIR6086-201ENST00000638065 55 ntBASIC1.49□□□□□ -2.17
CENPFP49454 U8.9-201ENST00000365667 134 ntBASIC1.49□□□□□ -2.17
CENPFP49454 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.49□□□□□ -2.17
CENPFP49454 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.49□□□□□ -2.17
CENPFP49454 AC005297.2-201ENST00000450430 606 ntBASIC1.49□□□□□ -2.17
CENPFP49454 SNORD121B-201ENST00000458838 81 ntBASIC1.49□□□□□ -2.17
CENPFP49454 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.49□□□□□ -2.17
CENPFP49454 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.49□□□□□ -2.17
CENPFP49454 AC105245.1-201ENST00000581934 244 ntBASIC1.49□□□□□ -2.17
CENPFP49454 ARF4P2-201ENST00000430209 526 ntBASIC1.49□□□□□ -2.17
CENPFP49454 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CENPFP49454 FO624990.1-201ENST00000636373 85 ntBASIC1.49□□□□□ -2.17
CENPFP49454 RBBP8P1-201ENST00000449447 1844 ntBASIC1.49□□□□□ -2.17
CENPFP49454 METTL21EP-201ENST00000298105 713 ntBASIC1.48□□□□□ -2.17
CENPFP49454 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.48□□□□□ -2.17
CENPFP49454 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CENPFP49454 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CENPFP49454 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.48□□□□□ -2.17
CENPFP49454 VN1R108P-201ENST00000431580 830 ntBASIC1.48□□□□□ -2.17
CENPFP49454 RPS23P4-201ENST00000487908 423 ntBASIC1.48□□□□□ -2.17
CENPFP49454 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.48□□□□□ -2.17
CENPFP49454 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.48□□□□□ -2.17
CENPFP49454 PABPC1P9-201ENST00000426076 1612 ntBASIC1.48□□□□□ -2.17
CENPFP49454 AC068700.1-201ENST00000565862 3754 ntBASIC1.48□□□□□ -2.17
CENPFP49454 RNU6-461P-201ENST00000364195 107 ntBASIC1.47□□□□□ -2.17
CENPFP49454 RPS12P24-201ENST00000412619 387 ntBASIC1.47□□□□□ -2.17
CENPFP49454 CYCSP48-201ENST00000417124 323 ntBASIC1.47□□□□□ -2.17
CENPFP49454 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.47□□□□□ -2.17
CENPFP49454 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.47□□□□□ -2.17
CENPFP49454 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.47□□□□□ -2.17
CENPFP49454 AC011472.4-201ENST00000615848 491 ntBASIC1.47□□□□□ -2.17
CENPFP49454 DUXAP9-208ENST00000622815 614 ntBASIC1.47□□□□□ -2.17
CENPFP49454 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.47□□□□□ -2.17
CENPFP49454 Y_RNA.274-201ENST00000364714 101 ntBASIC1.47□□□□□ -2.17
CENPFP49454 VN1R96P-201ENST00000446052 858 ntBASIC1.47□□□□□ -2.17
CENPFP49454 AC073901.1-201ENST00000462471 408 ntBASIC1.47□□□□□ -2.17
CENPFP49454 AC104115.2-201ENST00000523026 687 ntBASIC1.47□□□□□ -2.17
CENPFP49454 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.47□□□□□ -2.17
CENPFP49454 CBX3P8-201ENST00000532412 525 ntBASIC1.47□□□□□ -2.17
CENPFP49454 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms