Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PCP4P48539 PKD2L2-201ENST00000290431 2202 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCP4P48539 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PCP4P48539 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PCP4P48539 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
PCP4P48539 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PCP4P48539 U3.3-201ENST00000362986 216 ntBASIC3.08□□□□□ -1.92
PCP4P48539 Y_RNA.166-201ENST00000363730 102 ntBASIC3.08□□□□□ -1.92
PCP4P48539 RNU1-100P-201ENST00000365255 165 ntBASIC3.08□□□□□ -1.92
PCP4P48539 RNU1-64P-201ENST00000365443 163 ntBASIC3.08□□□□□ -1.92
PCP4P48539 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PCP4P48539 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
PCP4P48539 CD24P4-201ENST00000382840 243 ntBASIC3.08□□□□□ -1.92
PCP4P48539 MIR589-201ENST00000385238 99 ntBASIC3.08□□□□□ -1.92
PCP4P48539 AL122016.1-201ENST00000403365 367 ntBASIC3.08□□□□□ -1.92
PCP4P48539 AL356432.1-201ENST00000405809 419 ntBASIC3.08□□□□□ -1.92
PCP4P48539 RAP1BP3-201ENST00000407180 549 ntBASIC3.08□□□□□ -1.92
PCP4P48539 SNORA77.1-201ENST00000408156 125 ntBASIC3.08□□□□□ -1.92
PCP4P48539 OR3A2-201ENST00000408891 1076 ntBASIC3.08□□□□□ -1.92
PCP4P48539 SYNE1-AS1-201ENST00000412161 553 ntTSL 2 BASIC3.08□□□□□ -1.92
PCP4P48539 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.08□□□□□ -1.92
PCP4P48539 SNORD56-201ENST00000413522 71 ntBASIC3.08□□□□□ -1.92
PCP4P48539 AL096701.2-201ENST00000416920 238 ntBASIC3.08□□□□□ -1.92
PCP4P48539 PPIAP23-201ENST00000420099 497 ntBASIC3.08□□□□□ -1.92
PCP4P48539 AL355433.1-201ENST00000422804 300 ntBASIC3.08□□□□□ -1.92
PCP4P48539 AC007161.1-204ENST00000423039 460 ntBASIC3.08□□□□□ -1.92
PCP4P48539 RPL7P37-201ENST00000425095 738 ntBASIC3.08□□□□□ -1.92
PCP4P48539 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.08□□□□□ -1.92
PCP4P48539 AL359672.1-201ENST00000442302 409 ntBASIC3.08□□□□□ -1.92
PCP4P48539 SNRPEP8-201ENST00000442866 260 ntBASIC3.08□□□□□ -1.92
PCP4P48539 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC3.08□□□□□ -1.92
PCP4P48539 AC144530.1-201ENST00000452862 555 ntBASIC3.08□□□□□ -1.92
PCP4P48539 AC006539.3-201ENST00000454258 129 ntBASIC3.08□□□□□ -1.92
PCP4P48539 RPL23AP45-201ENST00000476406 468 ntBASIC3.08□□□□□ -1.92
PCP4P48539 RPS10P28-201ENST00000480396 498 ntBASIC3.08□□□□□ -1.92
PCP4P48539 RN7SL272P-201ENST00000487762 289 ntBASIC3.08□□□□□ -1.92
PCP4P48539 RN7SL632P-201ENST00000489734 266 ntBASIC3.08□□□□□ -1.92
PCP4P48539 AC026801.1-201ENST00000497178 464 ntBASIC3.08□□□□□ -1.92
PCP4P48539 AC027338.2-201ENST00000504382 526 ntBASIC3.08□□□□□ -1.92
PCP4P48539 AC097460.1-202ENST00000507494 769 ntTSL 5 BASIC3.08□□□□□ -1.92
PCP4P48539 AC111000.3-201ENST00000508057 576 ntBASIC3.08□□□□□ -1.92
PCP4P48539 AC114781.4-201ENST00000513707 639 ntBASIC3.08□□□□□ -1.92
PCP4P48539 LINC01021-205ENST00000514255 545 ntTSL 3 BASIC3.08□□□□□ -1.92
PCP4P48539 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.08□□□□□ -1.92
PCP4P48539 AC104051.1-201ENST00000520426 570 ntTSL 4 BASIC3.08□□□□□ -1.92
PCP4P48539 AC002428.1-201ENST00000523722 771 ntTSL 3 BASIC3.08□□□□□ -1.92
PCP4P48539 AC104576.1-201ENST00000524225 88 ntBASIC3.08□□□□□ -1.92
PCP4P48539 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.08□□□□□ -1.92
PCP4P48539 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.08□□□□□ -1.92
PCP4P48539 AC022404.1-201ENST00000555320 273 ntBASIC3.08□□□□□ -1.92
PCP4P48539 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC3.08□□□□□ -1.92
PCP4P48539 AC084783.1-201ENST00000565846 910 ntBASIC3.08□□□□□ -1.92
PCP4P48539 LINC02190-201ENST00000567765 568 ntTSL 4 BASIC3.08□□□□□ -1.92
PCP4P48539 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.08□□□□□ -1.92
PCP4P48539 MIR4425-201ENST00000580572 84 ntBASIC3.08□□□□□ -1.92
PCP4P48539 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.08□□□□□ -1.92
PCP4P48539 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.08□□□□□ -1.92
PCP4P48539 AC004852.3-201ENST00000614131 326 ntBASIC3.08□□□□□ -1.92
PCP4P48539 AC063943.3-201ENST00000615562 356 ntBASIC3.08□□□□□ -1.92
PCP4P48539 AL512638.3-201ENST00000620370 298 ntBASIC3.08□□□□□ -1.92
PCP4P48539 RMST_7.1-201ENST00000621935 268 ntBASIC3.08□□□□□ -1.92
PCP4P48539 AC007546.2-201ENST00000623996 360 ntBASIC3.08□□□□□ -1.92
PCP4P48539 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC3.08□□□□□ -1.92
PCP4P48539 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PCP4P48539 CDC27P3-201ENST00000635418 1910 ntBASIC3.08□□□□□ -1.92
PCP4P48539 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PCP4P48539 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCP4P48539 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PCP4P48539 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.07□□□□□ -1.92
PCP4P48539 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.07□□□□□ -1.92
PCP4P48539 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.07□□□□□ -1.92
PCP4P48539 MIR339-201ENST00000362153 94 ntBASIC3.07□□□□□ -1.92
PCP4P48539 RNA5SP477-201ENST00000362639 119 ntBASIC3.07□□□□□ -1.92
PCP4P48539 RNU6-942P-201ENST00000363002 107 ntBASIC3.07□□□□□ -1.92
PCP4P48539 Y_RNA.142-201ENST00000363491 102 ntBASIC3.07□□□□□ -1.92
PCP4P48539 Y_RNA.212-201ENST00000364177 102 ntBASIC3.07□□□□□ -1.92
PCP4P48539 RNU6-1280P-201ENST00000365211 107 ntBASIC3.07□□□□□ -1.92
PCP4P48539 MIR711-201ENST00000390201 76 ntBASIC3.07□□□□□ -1.92
PCP4P48539 MIR1296-201ENST00000408136 92 ntBASIC3.07□□□□□ -1.92
PCP4P48539 RN7SKP144-201ENST00000411108 279 ntBASIC3.07□□□□□ -1.92
PCP4P48539 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC3.07□□□□□ -1.92
PCP4P48539 AL929472.1-201ENST00000417484 429 ntBASIC3.07□□□□□ -1.92
PCP4P48539 ATG3P1-201ENST00000419507 911 ntBASIC3.07□□□□□ -1.92
PCP4P48539 AL590632.1-201ENST00000424289 371 ntBASIC3.07□□□□□ -1.92
PCP4P48539 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC3.07□□□□□ -1.92
PCP4P48539 RPL32P28-201ENST00000443577 397 ntBASIC3.07□□□□□ -1.92
PCP4P48539 AC006463.1-201ENST00000445929 232 ntBASIC3.07□□□□□ -1.92
PCP4P48539 HIGD1AP2-201ENST00000446367 280 ntBASIC3.07□□□□□ -1.92
PCP4P48539 AC125238.1-201ENST00000448842 249 ntBASIC3.07□□□□□ -1.92
PCP4P48539 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.07□□□□□ -1.92
PCP4P48539 AL031274.1-201ENST00000450334 232 ntBASIC3.07□□□□□ -1.92
PCP4P48539 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC3.07□□□□□ -1.92
PCP4P48539 AC073861.1-201ENST00000496294 459 ntBASIC3.07□□□□□ -1.92
PCP4P48539 AC116655.1-201ENST00000508324 901 ntBASIC3.07□□□□□ -1.92
PCP4P48539 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.07□□□□□ -1.92
PCP4P48539 AC092436.3-201ENST00000511788 257 ntBASIC3.07□□□□□ -1.92
PCP4P48539 Y_RNA.682-201ENST00000516457 100 ntBASIC3.07□□□□□ -1.92
PCP4P48539 AC022634.1-201ENST00000520765 532 ntBASIC3.07□□□□□ -1.92
PCP4P48539 AP000879.1-201ENST00000526174 976 ntTSL 5 BASIC3.07□□□□□ -1.92
PCP4P48539 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms