Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NEDD4P46934 EEF1B2P4-201ENST00000551398 348 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.3□□□□□ -1.88
NEDD4P46934 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.3□□□□□ -1.88
NEDD4P46934 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.3□□□□□ -1.88
NEDD4P46934 AC090115.4-201ENST00000609970 188 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 AC107871.2-201ENST00000612894 502 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 AC010338.1-201ENST00000621823 717 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 AC006111.3-201ENST00000622137 383 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NEDD4P46934 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.29□□□□□ -1.88
NEDD4P46934 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
NEDD4P46934 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NEDD4P46934 RNU6-989P-201ENST00000362756 107 ntBASIC3.29□□□□□ -1.88
NEDD4P46934 SNORA51.4-201ENST00000364993 124 ntBASIC3.29□□□□□ -1.88
NEDD4P46934 RNU6-253P-201ENST00000384730 105 ntBASIC3.29□□□□□ -1.88
NEDD4P46934 RPS15AP38-201ENST00000413110 372 ntBASIC3.29□□□□□ -1.88
NEDD4P46934 AC083875.1-201ENST00000419509 405 ntBASIC3.29□□□□□ -1.88
NEDD4P46934 AC234781.2-201ENST00000426370 994 ntBASIC3.29□□□□□ -1.88
NEDD4P46934 AL590233.1-201ENST00000430017 456 ntBASIC3.29□□□□□ -1.88
NEDD4P46934 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.29□□□□□ -1.88
NEDD4P46934 AC005297.2-201ENST00000450430 606 ntBASIC3.29□□□□□ -1.88
NEDD4P46934 RPL31P50-201ENST00000471002 296 ntBASIC3.29□□□□□ -1.88
NEDD4P46934 RPL5P23-201ENST00000496040 868 ntBASIC3.29□□□□□ -1.88
NEDD4P46934 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NEDD4P46934 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.29□□□□□ -1.88
NEDD4P46934 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.29□□□□□ -1.88
NEDD4P46934 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.29□□□□□ -1.88
NEDD4P46934 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.29□□□□□ -1.88
NEDD4P46934 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.29□□□□□ -1.88
NEDD4P46934 VN1R90P-201ENST00000595717 726 ntBASIC3.29□□□□□ -1.88
NEDD4P46934 AL353778.1-201ENST00000603149 408 ntBASIC3.29□□□□□ -1.88
NEDD4P46934 AC025811.1-201ENST00000604312 472 ntBASIC3.29□□□□□ -1.88
NEDD4P46934 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.29□□□□□ -1.88
NEDD4P46934 AC040168.1-201ENST00000623594 991 ntBASIC3.29□□□□□ -1.88
NEDD4P46934 AC091925.2-201ENST00000625059 256 ntBASIC3.29□□□□□ -1.88
NEDD4P46934 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NEDD4P46934 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.28□□□□□ -1.88
NEDD4P46934 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NEDD4P46934 SNORD51-201ENST00000384320 80 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 RNY3P9-201ENST00000384727 106 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 RNU6-952P-201ENST00000391164 108 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.28□□□□□ -1.88
NEDD4P46934 CYCSP45-201ENST00000402289 315 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 RNU4-78P-201ENST00000410940 126 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.28□□□□□ -1.88
NEDD4P46934 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 RPL7P30-201ENST00000420888 709 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
NEDD4P46934 AL390023.1-201ENST00000428836 262 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.28□□□□□ -1.88
NEDD4P46934 OR2B8P-201ENST00000432841 938 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 AL513043.1-201ENST00000439124 535 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 RPS24P13-201ENST00000442520 397 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.28□□□□□ -1.88
NEDD4P46934 HMGN2P21-201ENST00000447764 270 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 MEMO1P3-201ENST00000459811 302 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.28□□□□□ -1.88
NEDD4P46934 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.28□□□□□ -1.88
NEDD4P46934 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.28□□□□□ -1.88
NEDD4P46934 AC008015.1-201ENST00000555505 465 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 AC136618.2-201ENST00000575091 400 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.28□□□□□ -1.88
NEDD4P46934 AP000811.1-201ENST00000603803 651 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 AL357094.1-201ENST00000603845 844 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 AC068313.1-201ENST00000604028 1008 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 AL603755.1-201ENST00000619504 163 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 AL445264.1-201ENST00000621719 171 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.28□□□□□ -1.88
NEDD4P46934 MIR6733-201ENST00000635723 61 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 U6.98-201ENST00000637157 84 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NEDD4P46934 AC087359.1-201ENST00000508335 1740 ntBASIC3.28□□□□□ -1.88
NEDD4P46934 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.28□□□□□ -1.89
NEDD4P46934 OR5J1P-201ENST00000313544 939 ntBASIC3.27□□□□□ -1.89
NEDD4P46934 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NEDD4P46934 RPL9P7-201ENST00000330965 580 ntBASIC3.27□□□□□ -1.89
NEDD4P46934 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NEDD4P46934 Y_RNA.18-201ENST00000362461 102 ntBASIC3.27□□□□□ -1.89
NEDD4P46934 RNU6-263P-201ENST00000363811 107 ntBASIC3.27□□□□□ -1.89
NEDD4P46934 EI24P1-201ENST00000416584 867 ntBASIC3.27□□□□□ -1.89
NEDD4P46934 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.27□□□□□ -1.89
NEDD4P46934 AL365203.2-201ENST00000423444 196 ntBASIC3.27□□□□□ -1.89
NEDD4P46934 AC007742.1-201ENST00000425789 329 ntBASIC3.27□□□□□ -1.89
NEDD4P46934 AL593851.1-201ENST00000426171 157 ntBASIC3.27□□□□□ -1.89
NEDD4P46934 AC093151.1-201ENST00000427711 313 ntBASIC3.27□□□□□ -1.89
NEDD4P46934 AC087499.2-201ENST00000432861 149 ntBASIC3.27□□□□□ -1.89
NEDD4P46934 RPS20P5-201ENST00000434808 360 ntBASIC3.27□□□□□ -1.89
NEDD4P46934 ELOCP26-201ENST00000436067 329 ntBASIC3.27□□□□□ -1.89
NEDD4P46934 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.27□□□□□ -1.89
NEDD4P46934 AL022578.1-201ENST00000439330 1433 ntBASIC3.27□□□□□ -1.89
NEDD4P46934 MTND1P26-201ENST00000440488 538 ntBASIC3.27□□□□□ -1.89
NEDD4P46934 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.27□□□□□ -1.89
NEDD4P46934 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.27□□□□□ -1.89
NEDD4P46934 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.27□□□□□ -1.89
NEDD4P46934 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms