Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.1□□□□□ -1.91
NKX2-1P43699 uc_338.12-201ENST00000616344 181 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 AC073534.2-201ENST00000620377 381 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.1□□□□□ -1.91
NKX2-1P43699 MIR3653-201ENST00000625572 110 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 MIR7641-1-201ENST00000627518 61 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.1□□□□□ -1.91
NKX2-1P43699 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NKX2-1P43699 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NKX2-1P43699 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NKX2-1P43699 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
NKX2-1P43699 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NKX2-1P43699 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NKX2-1P43699 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.09□□□□□ -1.91
NKX2-1P43699 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
NKX2-1P43699 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
NKX2-1P43699 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
NKX2-1P43699 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NKX2-1P43699 MIR383-201ENST00000362257 73 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 RNU5A-1-201ENST00000362698 116 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 RNU1-32P-201ENST00000363937 159 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 RNU6-283P-201ENST00000364788 107 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 SNORA23-201ENST00000365128 182 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 MIR199A2-201ENST00000385289 110 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NKX2-1P43699 RNU6-278P-201ENST00000390945 109 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 RPL23AP32-201ENST00000395315 459 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 PPIAP31-201ENST00000405422 495 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 RN7SKP53-201ENST00000411337 315 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.09□□□□□ -1.91
NKX2-1P43699 HMGB3P23-201ENST00000414981 585 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 NDUFB4P7-201ENST00000423198 363 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.09□□□□□ -1.91
NKX2-1P43699 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.09□□□□□ -1.91
NKX2-1P43699 RPL18P10-201ENST00000425606 538 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 AC006989.1-201ENST00000427212 131 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.09□□□□□ -1.91
NKX2-1P43699 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.09□□□□□ -1.91
NKX2-1P43699 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.09□□□□□ -1.91
NKX2-1P43699 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.09□□□□□ -1.91
NKX2-1P43699 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.09□□□□□ -1.91
NKX2-1P43699 FTH1P1-201ENST00000437933 532 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 AC073614.1-201ENST00000438690 650 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NKX2-1P43699 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.09□□□□□ -1.91
NKX2-1P43699 AC099563.1-201ENST00000456086 418 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 AL359385.1-201ENST00000456509 365 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.09□□□□□ -1.91
NKX2-1P43699 AC006463.2-201ENST00000473326 348 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 AC041039.1-201ENST00000485656 536 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 HMGB3P15-201ENST00000507326 574 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 RNA5SP179-201ENST00000517284 121 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 MTND1P5-201ENST00000517906 940 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
NKX2-1P43699 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.09□□□□□ -1.91
NKX2-1P43699 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.09□□□□□ -1.91
NKX2-1P43699 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.09□□□□□ -1.91
NKX2-1P43699 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.09□□□□□ -1.91
NKX2-1P43699 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.09□□□□□ -1.91
NKX2-1P43699 AL606834.2-201ENST00000602954 668 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.09□□□□□ -1.91
NKX2-1P43699 AC091167.4-201ENST00000605079 184 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 AC121334.2-201ENST00000605387 271 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.09□□□□□ -1.91
NKX2-1P43699 AC024941.1-201ENST00000612250 334 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 AC090970.3-201ENST00000612566 866 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 AC114781.5-201ENST00000615297 108 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 MIR8059-201ENST00000620427 81 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.09□□□□□ -1.91
NKX2-1P43699 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.09□□□□□ -1.91
NKX2-1P43699 AC011944.2-201ENST00000624440 683 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 AC010149.2-201ENST00000637608 315 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 MTND5P26-201ENST00000426018 1752 ntBASIC3.09□□□□□ -1.91
NKX2-1P43699 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
NKX2-1P43699 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.92
NKX2-1P43699 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NKX2-1P43699 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.09□□□□□ -1.92
NKX2-1P43699 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NKX2-1P43699 ZNF807-201ENST00000328088 1707 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.08□□□□□ -1.92
NKX2-1P43699 GNG5P1-201ENST00000255500 204 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 PTMAP5-201ENST00000393073 333 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 AL591034.1-201ENST00000407447 340 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 RNU2-62P-201ENST00000410868 191 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.08□□□□□ -1.92
NKX2-1P43699 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.08□□□□□ -1.92
NKX2-1P43699 C1DP2-201ENST00000418167 426 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.08□□□□□ -1.92
NKX2-1P43699 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.08□□□□□ -1.92
NKX2-1P43699 AC018630.2-202ENST00000422992 927 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 TIMM9P3-201ENST00000428659 274 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-1P43699 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-1P43699 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.08□□□□□ -1.92
NKX2-1P43699 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.08□□□□□ -1.92
NKX2-1P43699 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.08□□□□□ -1.92
NKX2-1P43699 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-1P43699 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.08□□□□□ -1.92
NKX2-1P43699 MTCO3P45-201ENST00000443036 613 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms