Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 ELOCP30-201ENST00000447108 299 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 MTCO2P29-201ENST00000465212 189 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 RN7SL330P-201ENST00000469709 307 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 AC078918.1-201ENST00000498515 228 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 AC105252.1-201ENST00000503089 286 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 KCTD9P5-201ENST00000504141 1170 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.75□□□□□ -1.81
PTPN9P43378 RPL37P25-201ENST00000507308 276 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.75□□□□□ -1.81
PTPN9P43378 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN9P43378 AC022483.1-201ENST00000514020 567 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 RNU2-46P-201ENST00000517038 113 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 RNU6-1231P-201ENST00000517185 103 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 AP006245.1-201ENST00000522549 120 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.75□□□□□ -1.81
PTPN9P43378 COX6CP3-201ENST00000580869 223 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
PTPN9P43378 AP001429.1-201ENST00000602568 530 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 AC073648.5-201ENST00000603502 305 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 MIR4275-201ENST00000636486 87 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 AC119674.1-207ENST00000641355 633 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.75□□□□□ -1.81
PTPN9P43378 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.75□□□□□ -1.81
PTPN9P43378 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN9P43378 AC007656.2-201ENST00000624902 4547 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.75□□□□□ -1.81
PTPN9P43378 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.75□□□□□ -1.81
PTPN9P43378 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN9P43378 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTPN9P43378 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PTPN9P43378 AC010733.2-201ENST00000589496 5702 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTPN9P43378 RNU6-637P-201ENST00000384050 107 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 RPL23AP32-201ENST00000395315 459 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTPN9P43378 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.74□□□□□ -1.81
PTPN9P43378 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.74□□□□□ -1.81
PTPN9P43378 AL035423.1-201ENST00000420331 213 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 AL589872.1-201ENST00000426602 288 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.74□□□□□ -1.81
PTPN9P43378 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTPN9P43378 FTH1P1-201ENST00000437933 532 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 AL359073.1-201ENST00000448036 403 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.74□□□□□ -1.81
PTPN9P43378 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.74□□□□□ -1.81
PTPN9P43378 AC234775.1-201ENST00000454247 670 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 SNORD105B-201ENST00000458770 79 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 RNU7-59P-201ENST00000459101 61 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.74□□□□□ -1.81
PTPN9P43378 MTND1P3-201ENST00000484956 952 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.74□□□□□ -1.81
PTPN9P43378 HMGB1P22-201ENST00000505315 124 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.74□□□□□ -1.81
PTPN9P43378 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTPN9P43378 AC005921.1-201ENST00000510589 286 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 AC091133.4-201ENST00000511142 308 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 RNU6-430P-201ENST00000517078 107 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.74□□□□□ -1.81
PTPN9P43378 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTPN9P43378 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.74□□□□□ -1.81
PTPN9P43378 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.74□□□□□ -1.81
PTPN9P43378 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.74□□□□□ -1.81
PTPN9P43378 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.74□□□□□ -1.81
PTPN9P43378 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.74□□□□□ -1.81
PTPN9P43378 OR4T1P-201ENST00000554933 911 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTPN9P43378 AC009063.1-201ENST00000563342 702 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 AC116096.1-201ENST00000566804 2314 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 MIR3146-201ENST00000580367 79 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 MIR3118-1-201ENST00000581787 76 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.74□□□□□ -1.81
PTPN9P43378 KC877982.1-201ENST00000602313 470 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 XIAPP1-201ENST00000603162 600 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.74□□□□□ -1.81
PTPN9P43378 uc_338.12-201ENST00000616344 181 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 AL353748.2-201ENST00000622148 471 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 AP003355.3-201ENST00000623465 114 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 AC095031.1-201ENST00000623685 672 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 AL159972.1-201ENST00000625150 448 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.74□□□□□ -1.81
PTPN9P43378 AC138649.5-201ENST00000637456 137 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PTPN9P43378 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
PTPN9P43378 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PTPN9P43378 MTND4P5-201ENST00000435821 1374 ntBASIC3.74□□□□□ -1.81
PTPN9P43378 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.74□□□□□ -1.81
PTPN9P43378 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
PTPN9P43378 AC007823.1-201ENST00000569932 1566 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPN9P43378 RNA5SP124-201ENST00000362739 110 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 RNU6-223P-201ENST00000362830 107 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 SNORA7.2-201ENST00000364446 145 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 RNU6-259P-201ENST00000383999 107 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 MIR135A2-201ENST00000384854 100 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 CCNG1P1-201ENST00000406783 885 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 RNU6ATAC-201ENST00000408749 126 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 RPL30P2-201ENST00000414021 291 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 AC002075.2-201ENST00000425207 252 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPN9P43378 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms