Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC091965.4-201ENST00000607691 587 ntBASIC3.13□□□□□ -1.91
SOX3P41225 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SOX3P41225 MIR8058-201ENST00000615737 89 ntBASIC3.13□□□□□ -1.91
SOX3P41225 AC027807.2-201ENST00000616099 408 ntBASIC3.13□□□□□ -1.91
SOX3P41225 AC110801.1-201ENST00000623590 212 ntBASIC3.13□□□□□ -1.91
SOX3P41225 AC025048.6-202ENST00000627667 438 ntBASIC3.13□□□□□ -1.91
SOX3P41225 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SOX3P41225 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
SOX3P41225 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.12□□□□□ -1.91
SOX3P41225 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SOX3P41225 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
SOX3P41225 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SOX3P41225 MTND5P33-201ENST00000571250 1450 ntBASIC3.12□□□□□ -1.91
SOX3P41225 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.12□□□□□ -1.91
SOX3P41225 SNORD56.3-201ENST00000363507 71 ntBASIC3.12□□□□□ -1.91
SOX3P41225 RNU5F-7P-201ENST00000363696 115 ntBASIC3.12□□□□□ -1.91
SOX3P41225 SNORA7.2-201ENST00000364446 145 ntBASIC3.12□□□□□ -1.91
SOX3P41225 RNU4-91P-201ENST00000364778 135 ntBASIC3.12□□□□□ -1.91
SOX3P41225 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
SOX3P41225 U3.20-201ENST00000390909 217 ntBASIC3.12□□□□□ -1.91
SOX3P41225 AL359704.1-201ENST00000411586 781 ntBASIC3.12□□□□□ -1.91
SOX3P41225 RPL17P12-201ENST00000413391 526 ntBASIC3.12□□□□□ -1.91
SOX3P41225 Z99755.1-201ENST00000414048 380 ntBASIC3.12□□□□□ -1.91
SOX3P41225 AC245291.1-201ENST00000419501 328 ntBASIC3.12□□□□□ -1.91
SOX3P41225 AL137014.1-201ENST00000420490 1226 ntBASIC3.12□□□□□ -1.91
SOX3P41225 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.12□□□□□ -1.91
SOX3P41225 UBE2V1P13-201ENST00000436983 439 ntBASIC3.12□□□□□ -1.91
SOX3P41225 AL138799.3-201ENST00000438968 350 ntBASIC3.12□□□□□ -1.91
SOX3P41225 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.12□□□□□ -1.91
SOX3P41225 MTND1P9-201ENST00000453775 944 ntBASIC3.12□□□□□ -1.91
SOX3P41225 AC007967.1-201ENST00000455422 1159 ntBASIC3.12□□□□□ -1.91
SOX3P41225 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.12□□□□□ -1.91
SOX3P41225 RNA5SP269-201ENST00000459032 137 ntBASIC3.12□□□□□ -1.91
SOX3P41225 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.12□□□□□ -1.91
SOX3P41225 AC078785.3-201ENST00000476607 425 ntBASIC3.12□□□□□ -1.91
SOX3P41225 RPL32P34-201ENST00000486380 400 ntBASIC3.12□□□□□ -1.91
SOX3P41225 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.12□□□□□ -1.91
SOX3P41225 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SOX3P41225 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SOX3P41225 RNU6-528P-201ENST00000516926 100 ntBASIC3.12□□□□□ -1.91
SOX3P41225 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.12□□□□□ -1.91
SOX3P41225 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.12□□□□□ -1.91
SOX3P41225 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.12□□□□□ -1.91
SOX3P41225 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.12□□□□□ -1.91
SOX3P41225 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.12□□□□□ -1.91
SOX3P41225 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.12□□□□□ -1.91
SOX3P41225 MIR4276-201ENST00000584832 70 ntBASIC3.12□□□□□ -1.91
SOX3P41225 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.12□□□□□ -1.91
SOX3P41225 TPMTP1-201ENST00000592307 737 ntBASIC3.12□□□□□ -1.91
SOX3P41225 U73023.1-201ENST00000603134 700 ntBASIC3.12□□□□□ -1.91
SOX3P41225 AC068276.1-201ENST00000605793 379 ntBASIC3.12□□□□□ -1.91
SOX3P41225 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.12□□□□□ -1.91
SOX3P41225 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.12□□□□□ -1.91
SOX3P41225 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SOX3P41225 AC009902.3-201ENST00000606235 2172 ntBASIC3.12□□□□□ -1.91
SOX3P41225 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
SOX3P41225 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SOX3P41225 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SOX3P41225 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.11□□□□□ -1.91
SOX3P41225 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SOX3P41225 AL356274.2-201ENST00000624379 3752 ntBASIC3.11□□□□□ -1.91
SOX3P41225 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.11□□□□□ -1.91
SOX3P41225 RNU5E-5P-201ENST00000365379 116 ntBASIC3.11□□□□□ -1.91
SOX3P41225 MIR135A2-201ENST00000384854 100 ntBASIC3.11□□□□□ -1.91
SOX3P41225 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.11□□□□□ -1.91
SOX3P41225 AC005300.1-201ENST00000428401 373 ntBASIC3.11□□□□□ -1.91
SOX3P41225 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.11□□□□□ -1.91
SOX3P41225 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.11□□□□□ -1.91
SOX3P41225 MTCO2P16-201ENST00000436962 677 ntBASIC3.11□□□□□ -1.91
SOX3P41225 RPL23AP22-201ENST00000437556 453 ntBASIC3.11□□□□□ -1.91
SOX3P41225 THAP5P1-201ENST00000439089 262 ntBASIC3.11□□□□□ -1.91
SOX3P41225 MTND1P29-201ENST00000448112 647 ntBASIC3.11□□□□□ -1.91
SOX3P41225 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.11□□□□□ -1.91
SOX3P41225 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.11□□□□□ -1.91
SOX3P41225 AP1S2P1-201ENST00000457344 379 ntBASIC3.11□□□□□ -1.91
SOX3P41225 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.11□□□□□ -1.91
SOX3P41225 MTND4LP3-201ENST00000468320 276 ntBASIC3.11□□□□□ -1.91
SOX3P41225 RPL31P13-201ENST00000484151 370 ntBASIC3.11□□□□□ -1.91
SOX3P41225 AC068724.1-201ENST00000487100 792 ntBASIC3.11□□□□□ -1.91
SOX3P41225 RPL7P23-201ENST00000493874 747 ntBASIC3.11□□□□□ -1.91
SOX3P41225 AC096751.1-202ENST00000502691 1067 ntBASIC3.11□□□□□ -1.91
SOX3P41225 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.11□□□□□ -1.91
SOX3P41225 AC023141.12-201ENST00000512399 199 ntBASIC3.11□□□□□ -1.91
SOX3P41225 FABP5P5-201ENST00000515537 406 ntBASIC3.11□□□□□ -1.91
SOX3P41225 AC068657.1-201ENST00000520807 306 ntBASIC3.11□□□□□ -1.91
SOX3P41225 MTND4LP18-201ENST00000526864 291 ntBASIC3.11□□□□□ -1.91
SOX3P41225 AC109635.4-202ENST00000531666 412 ntBASIC3.11□□□□□ -1.91
SOX3P41225 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.11□□□□□ -1.91
SOX3P41225 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.11□□□□□ -1.91
SOX3P41225 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.11□□□□□ -1.91
SOX3P41225 AC007115.1-201ENST00000546853 234 ntBASIC3.11□□□□□ -1.91
SOX3P41225 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.11□□□□□ -1.91
SOX3P41225 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.11□□□□□ -1.91
SOX3P41225 MIR5697-201ENST00000578045 78 ntBASIC3.11□□□□□ -1.91
SOX3P41225 OR4K8P-201ENST00000578842 1048 ntBASIC3.11□□□□□ -1.91
SOX3P41225 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.11□□□□□ -1.91
SOX3P41225 AC073544.2-201ENST00000601155 540 ntBASIC3.11□□□□□ -1.91
SOX3P41225 AC006254.3-201ENST00000603353 884 ntBASIC3.11□□□□□ -1.91
SOX3P41225 AC239868.4-201ENST00000608318 671 ntBASIC3.11□□□□□ -1.91
SOX3P41225 TUG1_1.1-201ENST00000610654 145 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms