Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXD13P35453 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HOXD13P35453 RNU6-501P-201ENST00000364072 100 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 MIR514A1-201ENST00000385133 98 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 MIR670-201ENST00000390142 98 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 U8.14-201ENST00000390843 143 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 RNU6-278P-201ENST00000390945 109 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 SNORA48.7-201ENST00000391302 135 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 AL109755.1-201ENST00000401791 649 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 TXNP7-201ENST00000406296 293 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 RNU6-1077P-201ENST00000410506 102 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXD13P35453 UBE2FP1-201ENST00000416536 447 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 AL389915.1-201ENST00000422463 466 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXD13P35453 AC009237.8-201ENST00000445492 379 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 Z75741.1-201ENST00000446793 314 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 AL139824.2-201ENST00000458731 1095 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 RNU7-59P-201ENST00000459101 61 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 AC010468.1-201ENST00000461022 817 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 BZW1P2-201ENST00000473537 826 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 RPL30P6-201ENST00000475925 342 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 HMGN2P13-201ENST00000476476 274 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 RPL30P5-201ENST00000494923 336 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXD13P35453 AC114967.1-201ENST00000504890 259 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 SCARNA15.2-201ENST00000516409 127 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 RNU6-232P-201ENST00000517144 64 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 AP000907.2-201ENST00000530827 353 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXD13P35453 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXD13P35453 AC012435.1-202ENST00000568772 240 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 MIR4276-201ENST00000584832 70 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 UBE2L4-201ENST00000587688 464 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXD13P35453 AL353778.1-201ENST00000603149 408 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 AC068313.1-201ENST00000604028 1008 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 AL162713.1-201ENST00000604480 262 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 AL139344.1-201ENST00000605228 195 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 AC007038.2-201ENST00000608095 740 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXD13P35453 AC103710.1-201ENST00000610003 901 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 AL360219.1-201ENST00000610230 366 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 uc_338.1-201ENST00000612113 180 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXD13P35453 SNORD39.4-201ENST00000620099 78 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 AL158801.5-201ENST00000623123 465 ntBASIC3.61□□□□□ -1.83
HOXD13P35453 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXD13P35453 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
HOXD13P35453 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXD13P35453 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXD13P35453 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXD13P35453 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
HOXD13P35453 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HOXD13P35453 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HOXD13P35453 RN7SKP27-201ENST00000410684 333 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 RPS7P13-201ENST00000413955 498 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 AC107081.1-201ENST00000414975 361 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 RPS15AP6-201ENST00000420703 385 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 AL365203.2-201ENST00000423444 196 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 AC005019.1-201ENST00000436455 431 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.6□□□□□ -1.83
HOXD13P35453 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXD13P35453 VN1R34P-201ENST00000447387 883 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 CYCSP35-201ENST00000451978 304 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXD13P35453 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.6□□□□□ -1.83
HOXD13P35453 RPS20P20-201ENST00000460498 340 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HOXD13P35453 RPS15AP36-201ENST00000492022 382 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 OR2A20P-203ENST00000498397 1268 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 HSPD1P15-201ENST00000505573 1122 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 CDC42P4-201ENST00000510507 563 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 AC116347.2-201ENST00000514912 523 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 RNU1-143P-201ENST00000516296 146 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 AC104027.1-201ENST00000521887 300 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 AP000857.1-201ENST00000532151 543 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 AF038458.1-201ENST00000588406 262 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXD13P35453 AC008739.3-201ENST00000603262 127 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 OR10AB1P-201ENST00000609613 938 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 U1.23-201ENST00000610293 146 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 AC122133.1-201ENST00000613964 233 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 RNU1-68P-201ENST00000615382 146 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 MIR7844-201ENST00000616161 122 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 AL138880.2-201ENST00000616214 239 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 AL603755.1-201ENST00000619504 163 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 U1.39-201ENST00000621562 146 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 AL356266.1-201ENST00000623311 483 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 AC079248.2-201ENST00000623779 326 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 AC112204.3-201ENST00000623822 332 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXD13P35453 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HOXD13P35453 MTCO1P12-201ENST00000414273 1543 ntBASIC3.6□□□□□ -1.83
HOXD13P35453 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXD13P35453 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HOXD13P35453 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HOXD13P35453 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms