Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.73□□□□□ -1.97
SHMT2P34897 CYCSP2-201ENST00000558168 301 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 AL512347.1-201ENST00000566420 503 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 MTCO3P13-201ENST00000577757 781 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 AC006504.3-201ENST00000586818 523 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 DUXAP3-201ENST00000603616 594 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 AC109809.1-201ENST00000619665 545 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 AC006111.3-201ENST00000622137 383 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 AP003122.6-201ENST00000623831 495 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.73□□□□□ -1.97
SHMT2P34897 AL079343.1-201ENST00000572358 1771 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SHMT2P34897 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SHMT2P34897 AC106754.1-201ENST00000562632 1513 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 AC092447.7-201ENST00000422212 1621 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 TAB3P1-202ENST00000452645 1634 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHMT2P34897 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHMT2P34897 MIR26A1-201ENST00000362205 77 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 RNU4-92P-201ENST00000363783 136 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 Y_RNA.311-201ENST00000365068 96 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SHMT2P34897 SNORA18.3-201ENST00000384122 132 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 RNU6-906P-201ENST00000384700 70 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 AL031679.1-201ENST00000400616 525 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 AL356473.1-201ENST00000406203 1408 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 RNA5SP492-201ENST00000411330 114 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.72□□□□□ -1.97
SHMT2P34897 AC105272.1-201ENST00000438604 198 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 AL513043.1-201ENST00000439124 535 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 AL022578.1-201ENST00000439330 1433 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 AC025750.2-201ENST00000442609 450 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 AC112653.1-201ENST00000443851 386 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 COX6CP2-201ENST00000444980 225 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 RAC1P7-201ENST00000445367 377 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.72□□□□□ -1.97
SHMT2P34897 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.72□□□□□ -1.97
SHMT2P34897 AC092155.2-201ENST00000454675 477 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 MTND1P16-201ENST00000465177 898 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 RPS23P3-201ENST00000470993 430 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 RPL23AP11-201ENST00000475260 469 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.72□□□□□ -1.97
SHMT2P34897 AC017037.2-201ENST00000513850 890 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.72□□□□□ -1.97
SHMT2P34897 DEFB131D-201ENST00000526803 184 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.72□□□□□ -1.97
SHMT2P34897 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.72□□□□□ -1.97
SHMT2P34897 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.72□□□□□ -1.97
SHMT2P34897 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.72□□□□□ -1.97
SHMT2P34897 AC099786.3-201ENST00000565735 1410 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 OR4K8P-201ENST00000578842 1048 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.72□□□□□ -1.97
SHMT2P34897 RPP40P2-201ENST00000603596 712 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 DUXAP11-201ENST00000603858 526 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 AL031176.1-201ENST00000604554 466 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 AC106900.2-201ENST00000604994 317 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 AL445264.1-201ENST00000621719 171 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 OR4G3P-201ENST00000633500 913 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 AC116618.1-201ENST00000634617 774 ntBASIC2.72□□□□□ -1.97
SHMT2P34897 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHMT2P34897 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
SHMT2P34897 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.72□□□□□ -1.97
SHMT2P34897 AL390862.1-201ENST00000635467 1469 ntBASIC2.71□□□□□ -1.97
SHMT2P34897 AC009812.4-201ENST00000569134 1805 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SHMT2P34897 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SHMT2P34897 SNORA80A-201ENST00000363922 136 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 RNU6-173P-201ENST00000364215 104 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 Y_RNA.465-201ENST00000384293 102 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 Y_RNA.548-201ENST00000384656 105 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 MIR887-201ENST00000401258 79 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 BEND7P1-201ENST00000422058 457 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 MTCO2P5-201ENST00000422621 426 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 USP9YP36-201ENST00000424581 829 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 AC233728.2-201ENST00000425348 757 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 AC109583.1-201ENST00000432156 268 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.71□□□□□ -1.98
SHMT2P34897 USP9YP24-201ENST00000434374 697 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 SDCBPP1-201ENST00000440192 890 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 USP9YP17-201ENST00000444617 696 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.71□□□□□ -1.98
SHMT2P34897 MTCO3P11-201ENST00000455103 774 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.71□□□□□ -1.98
SHMT2P34897 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SHMT2P34897 AC103975.1-201ENST00000482506 483 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 AC096576.1-201ENST00000489014 359 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 AP001025.2-201ENST00000490908 477 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 AC109445.1-201ENST00000512356 383 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 AC091826.1-201ENST00000514065 313 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 AC026801.2-201ENST00000515352 425 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.71□□□□□ -1.98
SHMT2P34897 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.71□□□□□ -1.98
SHMT2P34897 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SHMT2P34897 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SHMT2P34897 ELOCP31-201ENST00000540463 467 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.71□□□□□ -1.98
SHMT2P34897 SETP2-201ENST00000553886 926 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms