Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC114797.1-201ENST00000514003 728 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 AC105417.1-201ENST00000514691 285 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 RNU7-143P-201ENST00000516781 65 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC6A4P31645 AL133271.1-201ENST00000538229 291 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC6A4P31645 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC6A4P31645 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.21□□□□□ -1.74
SLC6A4P31645 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.21□□□□□ -1.74
SLC6A4P31645 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.21□□□□□ -1.74
SLC6A4P31645 AP001429.1-201ENST00000602568 530 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 AC093648.1-201ENST00000623546 606 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 AC024614.3-201ENST00000637860 256 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SLC6A4P31645 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SLC6A4P31645 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SLC6A4P31645 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SLC6A4P31645 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SLC6A4P31645 Y_RNA.255-201ENST00000364581 97 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 MIR454-201ENST00000390180 115 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SLC6A4P31645 AL109755.1-201ENST00000401791 649 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 AL354719.1-201ENST00000406535 843 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.2□□□□□ -1.74
SLC6A4P31645 RNU6-628P-201ENST00000410675 107 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 AL160275.2-201ENST00000412010 394 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 BEND7P1-201ENST00000422058 457 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC6A4P31645 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.2□□□□□ -1.74
SLC6A4P31645 MRPS18BP2-201ENST00000434310 759 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 RPL36AP6-201ENST00000435770 321 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 RPS15AP9-201ENST00000439856 381 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.2□□□□□ -1.74
SLC6A4P31645 PPIAP3-201ENST00000450588 505 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.2□□□□□ -1.74
SLC6A4P31645 PMCHL2-203ENST00000457791 237 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC6A4P31645 RPL7P23-201ENST00000493874 747 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 AC139783.2-201ENST00000504847 1145 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 RNU6-507P-201ENST00000516045 100 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.2□□□□□ -1.74
SLC6A4P31645 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.2□□□□□ -1.74
SLC6A4P31645 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC6A4P31645 MIR4429-201ENST00000580105 73 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.2□□□□□ -1.74
SLC6A4P31645 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC6A4P31645 AL035413.2-201ENST00000604801 525 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 MIR432-201ENST00000606207 94 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC6A4P31645 MIR6868-201ENST00000611215 58 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC6A4P31645 MIR7154-201ENST00000620673 73 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 MIR7702-201ENST00000621931 59 ntBASIC4.2□□□□□ -1.74
SLC6A4P31645 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC6A4P31645 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC6A4P31645 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SLC6A4P31645 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC6A4P31645 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC6A4P31645 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC6A4P31645 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC6A4P31645 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
SLC6A4P31645 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC6A4P31645 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC6A4P31645 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.19□□□□□ -1.74
SLC6A4P31645 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC6A4P31645 RN7SKP280-201ENST00000364196 304 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 RNA5SP513-201ENST00000364648 118 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 Y_RNA.367-201ENST00000365544 101 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC6A4P31645 OR2AS1P-201ENST00000427827 319 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 CKS1BP5-201ENST00000434172 273 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 HLA-N-201ENST00000437516 135 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 AL121871.1-201ENST00000443413 436 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC6A4P31645 RPS11P1-201ENST00000451072 473 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 AC126389.1-201ENST00000477436 290 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.19□□□□□ -1.74
SLC6A4P31645 AL163973.1-201ENST00000484753 577 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 RPL29P14-201ENST00000495837 428 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 HMGN1P12-201ENST00000499125 195 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 RPL38P4-201ENST00000502376 214 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC6A4P31645 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.19□□□□□ -1.74
SLC6A4P31645 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC6A4P31645 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.19□□□□□ -1.74
SLC6A4P31645 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC6A4P31645 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC6A4P31645 AC005261.5-201ENST00000596280 355 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 LLPHP1-201ENST00000603571 367 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 AC010591.1-201ENST00000603941 649 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 IGHV3-29-201ENST00000604817 344 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 AC010680.4-201ENST00000605334 543 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 AL031666.3-201ENST00000609320 1006 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 AC015813.4-201ENST00000610469 179 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 RMST_3.1-201ENST00000611651 109 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 MIR6875-201ENST00000617506 72 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 AL354950.2-201ENST00000617939 290 ntBASIC4.19□□□□□ -1.74
SLC6A4P31645 MIR6130-201ENST00000619419 109 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms