Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 Y_RNA.548-201ENST00000384656 105 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 SNORA1.3-201ENST00000384676 136 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 MIR493-201ENST00000385254 89 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 RNU6-1077P-201ENST00000410506 102 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.38□□□□□ -1.87
PTPN3P26045 AC009518.2-201ENST00000418056 731 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 AL389915.1-201ENST00000422463 466 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.38□□□□□ -1.87
PTPN3P26045 MED14P1-201ENST00000430517 648 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.38□□□□□ -1.87
PTPN3P26045 UBE2V1P13-201ENST00000436983 439 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 AL512286.1-201ENST00000439244 400 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 AC112653.1-201ENST00000443851 386 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.38□□□□□ -1.87
PTPN3P26045 MTND3P7-201ENST00000474435 343 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.38□□□□□ -1.87
PTPN3P26045 APOOP4-201ENST00000513530 597 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 AC026801.2-201ENST00000515352 425 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.38□□□□□ -1.87
PTPN3P26045 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.38□□□□□ -1.87
PTPN3P26045 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.38□□□□□ -1.87
PTPN3P26045 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.38□□□□□ -1.87
PTPN3P26045 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.38□□□□□ -1.87
PTPN3P26045 AC091489.2-201ENST00000566263 604 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 MIR4307-201ENST00000582802 84 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 AC103710.4-201ENST00000609301 899 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 uc_338.1-201ENST00000612113 180 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.38□□□□□ -1.87
PTPN3P26045 AC092192.1-201ENST00000633154 1018 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 MIR4275-201ENST00000636486 87 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTPN3P26045 AC009902.3-201ENST00000606235 2172 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 AC012321.1-201ENST00000561622 1588 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 AC092326.2-201ENST00000624772 1561 ntBASIC3.38□□□□□ -1.87
PTPN3P26045 AC021755.1-201ENST00000559747 1447 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.37□□□□□ -1.87
PTPN3P26045 AC008568.2-201ENST00000623862 2313 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.37□□□□□ -1.87
PTPN3P26045 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTPN3P26045 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.37□□□□□ -1.87
PTPN3P26045 Y_RNA.560-201ENST00000384689 102 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 U3.20-201ENST00000390909 217 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 RPS4XP3-201ENST00000398541 413 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.37□□□□□ -1.87
PTPN3P26045 TPMTP3-201ENST00000411928 735 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 AL365184.2-201ENST00000431139 435 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN3P26045 LARP1BP3-201ENST00000437229 869 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 HIGD1AP11-201ENST00000438361 280 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN3P26045 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.37□□□□□ -1.87
PTPN3P26045 AC008155.2-201ENST00000464337 397 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 RPS4XP22-201ENST00000480755 780 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.37□□□□□ -1.87
PTPN3P26045 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN3P26045 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN3P26045 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN3P26045 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTPN3P26045 RNU6-711P-201ENST00000517255 106 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 DUXAP2-201ENST00000519198 589 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN3P26045 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTPN3P26045 AC012435.1-202ENST00000568772 240 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN3P26045 MIR4276-201ENST00000584832 70 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 AL158211.4-201ENST00000606988 584 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 AL355365.1-201ENST00000616480 294 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 AC008443.7-201ENST00000622195 246 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 AL356266.1-201ENST00000623311 483 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 AC091965.5-201ENST00000624785 342 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTPN3P26045 AC005183.1-201ENST00000603687 1979 ntBASIC3.37□□□□□ -1.87
PTPN3P26045 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTPN3P26045 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PTPN3P26045 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN3P26045 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN3P26045 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPN3P26045 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN3P26045 RNU6-1078P-201ENST00000364522 103 ntBASIC3.36□□□□□ -1.87
PTPN3P26045 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN3P26045 SKINT1L-201ENST00000401057 817 ntBASIC3.36□□□□□ -1.87
PTPN3P26045 RPS3AP24-201ENST00000407896 734 ntBASIC3.36□□□□□ -1.87
PTPN3P26045 RNA5SP229-201ENST00000410809 99 ntBASIC3.36□□□□□ -1.87
PTPN3P26045 RPS7P13-201ENST00000413955 498 ntBASIC3.36□□□□□ -1.87
PTPN3P26045 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPN3P26045 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN3P26045 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.36□□□□□ -1.87
PTPN3P26045 OR4K11P-201ENST00000431829 904 ntBASIC3.36□□□□□ -1.87
PTPN3P26045 SETP8-201ENST00000435341 628 ntBASIC3.36□□□□□ -1.87
PTPN3P26045 RPL37P21-201ENST00000435890 276 ntBASIC3.36□□□□□ -1.87
PTPN3P26045 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPN3P26045 MTND1P30-201ENST00000441241 901 ntBASIC3.36□□□□□ -1.87
PTPN3P26045 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPN3P26045 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN3P26045 HMGB3P8-201ENST00000449709 577 ntBASIC3.36□□□□□ -1.87
PTPN3P26045 RPL36AP33-201ENST00000450395 310 ntBASIC3.36□□□□□ -1.87
PTPN3P26045 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPN3P26045 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPN3P26045 AP1S2P1-201ENST00000457344 379 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms