Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.24□□□□□ -1.73
POLR2AP24928 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
POLR2AP24928 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
POLR2AP24928 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
POLR2AP24928 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.24□□□□□ -1.73
POLR2AP24928 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
POLR2AP24928 HMGB1P17-201ENST00000403495 628 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 SPA17P1-201ENST00000416656 452 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.23□□□□□ -1.73
POLR2AP24928 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.23□□□□□ -1.73
POLR2AP24928 AC010655.1-201ENST00000449336 292 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.23□□□□□ -1.73
POLR2AP24928 AC093278.1-201ENST00000494700 600 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 HMGB1P28-201ENST00000507778 552 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.23□□□□□ -1.73
POLR2AP24928 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.23□□□□□ -1.73
POLR2AP24928 COX6B1P6-201ENST00000522347 255 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.23□□□□□ -1.73
POLR2AP24928 MIR5004-201ENST00000579078 107 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.23□□□□□ -1.73
POLR2AP24928 AC018638.8-201ENST00000588755 281 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.23□□□□□ -1.73
POLR2AP24928 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.23□□□□□ -1.73
POLR2AP24928 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
POLR2AP24928 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
POLR2AP24928 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.23□□□□□ -1.73
POLR2AP24928 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
POLR2AP24928 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.23□□□□□ -1.73
POLR2AP24928 RNU4-66P-201ENST00000365199 138 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 SNORD116-29-201ENST00000384516 83 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 RNU6-952P-201ENST00000391164 108 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 AL356421.1-201ENST00000403255 413 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 AL357075.1-201ENST00000404107 726 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 BTBD10P2-201ENST00000404779 676 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 TXNP7-201ENST00000406296 293 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.23□□□□□ -1.73
POLR2AP24928 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.23□□□□□ -1.73
POLR2AP24928 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.23□□□□□ -1.73
POLR2AP24928 GPR143P-201ENST00000434155 205 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 SKP1P1-201ENST00000438081 489 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 AC103851.1-201ENST00000506833 274 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 Y_RNA.675-201ENST00000516389 149 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.23□□□□□ -1.73
POLR2AP24928 AP003181.2-201ENST00000528941 181 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 AC023050.3-201ENST00000541142 333 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 AC010928.3-201ENST00000587712 541 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 AC011712.1-201ENST00000588959 234 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.23□□□□□ -1.73
POLR2AP24928 FRG1KP-201ENST00000623592 341 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
POLR2AP24928 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
POLR2AP24928 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
POLR2AP24928 UBE3AP2-201ENST00000429033 2259 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.23□□□□□ -1.73
POLR2AP24928 AL356274.2-201ENST00000624379 3752 ntBASIC4.23□□□□□ -1.73
POLR2AP24928 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
POLR2AP24928 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
POLR2AP24928 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.22□□□□□ -1.73
POLR2AP24928 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
POLR2AP24928 AC107081.3-201ENST00000612715 2034 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
POLR2AP24928 RNU6-451P-201ENST00000362921 107 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 SNORA62.2-201ENST00000364672 152 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
POLR2AP24928 Y_RNA.409-201ENST00000383990 98 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
POLR2AP24928 RNA5SP424-201ENST00000390988 115 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 UBA52P6-201ENST00000399822 382 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 BX323014.1-201ENST00000412876 237 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 AC004987.3-201ENST00000413879 771 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.22□□□□□ -1.73
POLR2AP24928 BX842559.1-201ENST00000419615 532 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 OR51AB1P-201ENST00000429046 620 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 AC236972.2-201ENST00000434979 310 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 RSU1P2-202ENST00000437884 485 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 AC140076.1-201ENST00000449897 361 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.22□□□□□ -1.73
POLR2AP24928 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.22□□□□□ -1.73
POLR2AP24928 AC026410.2-201ENST00000460281 156 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 RPS15AP17-201ENST00000470598 390 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.22□□□□□ -1.73
POLR2AP24928 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.22□□□□□ -1.73
POLR2AP24928 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.22□□□□□ -1.73
POLR2AP24928 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.22□□□□□ -1.73
POLR2AP24928 AC122134.1-201ENST00000565664 1104 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 AC025678.1-201ENST00000567861 338 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 OR10AB1P-201ENST00000609613 938 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 AL445264.1-201ENST00000621719 171 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.22□□□□□ -1.73
POLR2AP24928 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
POLR2AP24928 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.22□□□□□ -1.73
POLR2AP24928 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
POLR2AP24928 OR11H5P-202ENST00000641612 1325 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.22□□□□□ -1.73
POLR2AP24928 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
POLR2AP24928 Y_RNA.138-201ENST00000363462 102 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 Y_RNA.146-201ENST00000363549 102 ntBASIC4.22□□□□□ -1.73
POLR2AP24928 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms