Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RNU6-1207P-201ENST00000384343 107 ntBASIC3.35□□□□□ -1.87
CDH3P22223 MT-TH-201ENST00000387441 69 ntBASIC3.35□□□□□ -1.87
CDH3P22223 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH3P22223 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.35□□□□□ -1.87
CDH3P22223 AC245291.1-201ENST00000419501 328 ntBASIC3.35□□□□□ -1.87
CDH3P22223 YPEL5P1-201ENST00000419731 367 ntBASIC3.35□□□□□ -1.87
CDH3P22223 AL365184.2-201ENST00000431139 435 ntBASIC3.35□□□□□ -1.87
CDH3P22223 AC118469.1-201ENST00000442943 488 ntBASIC3.35□□□□□ -1.87
CDH3P22223 AC140076.1-201ENST00000449897 361 ntBASIC3.35□□□□□ -1.87
CDH3P22223 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH3P22223 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH3P22223 snoU13.8-201ENST00000458890 104 ntBASIC3.35□□□□□ -1.87
CDH3P22223 snoU13.22-201ENST00000459428 104 ntBASIC3.35□□□□□ -1.87
CDH3P22223 RN7SL594P-201ENST00000470590 287 ntBASIC3.35□□□□□ -1.87
CDH3P22223 RPS23P3-201ENST00000470993 430 ntBASIC3.35□□□□□ -1.87
CDH3P22223 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH3P22223 AC068724.1-201ENST00000487100 792 ntBASIC3.35□□□□□ -1.87
CDH3P22223 AC020893.1-201ENST00000502452 580 ntBASIC3.35□□□□□ -1.87
CDH3P22223 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.35□□□□□ -1.87
CDH3P22223 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDH3P22223 AC004062.1-201ENST00000509926 645 ntBASIC3.35□□□□□ -1.87
CDH3P22223 AC117522.2-201ENST00000510049 657 ntBASIC3.35□□□□□ -1.87
CDH3P22223 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH3P22223 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH3P22223 AC017037.2-201ENST00000513850 890 ntBASIC3.35□□□□□ -1.87
CDH3P22223 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH3P22223 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.35□□□□□ -1.87
CDH3P22223 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.35□□□□□ -1.87
CDH3P22223 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.35□□□□□ -1.87
CDH3P22223 NCAPGP2-201ENST00000557911 754 ntBASIC3.35□□□□□ -1.87
CDH3P22223 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH3P22223 PCMTD1P2-201ENST00000565017 355 ntBASIC3.35□□□□□ -1.87
CDH3P22223 AC087481.2-201ENST00000565492 330 ntBASIC3.35□□□□□ -1.87
CDH3P22223 AP005136.1-201ENST00000579765 429 ntBASIC3.35□□□□□ -1.87
CDH3P22223 AF131215.7-201ENST00000602443 707 ntBASIC3.35□□□□□ -1.87
CDH3P22223 AL022161.1-201ENST00000604390 213 ntBASIC3.35□□□□□ -1.87
CDH3P22223 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDH3P22223 AC105129.3-201ENST00000605455 485 ntBASIC3.35□□□□□ -1.87
CDH3P22223 OR2AS2P-201ENST00000606902 342 ntBASIC3.35□□□□□ -1.87
CDH3P22223 AC093783.1-201ENST00000612976 329 ntBASIC3.35□□□□□ -1.87
CDH3P22223 AL356585.4-201ENST00000623078 1229 ntBASIC3.35□□□□□ -1.87
CDH3P22223 AL645937.1-201ENST00000641739 1652 ntBASIC3.35□□□□□ -1.87
CDH3P22223 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.35□□□□□ -1.87
CDH3P22223 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH3P22223 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH3P22223 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH3P22223 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
CDH3P22223 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.34□□□□□ -1.87
CDH3P22223 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CDH3P22223 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CDH3P22223 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDH3P22223 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.34□□□□□ -1.87
CDH3P22223 ZNF807-201ENST00000328088 1707 ntBASIC3.34□□□□□ -1.87
CDH3P22223 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDH3P22223 MIR148B-201ENST00000362252 99 ntBASIC3.34□□□□□ -1.87
CDH3P22223 RNU5F-6P-201ENST00000362979 116 ntBASIC3.34□□□□□ -1.87
CDH3P22223 RNU6-501P-201ENST00000364072 100 ntBASIC3.34□□□□□ -1.87
CDH3P22223 SNORA70.4-201ENST00000365509 134 ntBASIC3.34□□□□□ -1.87
CDH3P22223 DYNLT3P1-201ENST00000378574 347 ntBASIC3.34□□□□□ -1.87
CDH3P22223 SNORD116-1-201ENST00000384335 95 ntBASIC3.34□□□□□ -1.87
CDH3P22223 SNORD17-201ENST00000390930 237 ntBASIC3.34□□□□□ -1.87
CDH3P22223 SNORA26.8-201ENST00000391306 124 ntBASIC3.34□□□□□ -1.87
CDH3P22223 AL356421.1-201ENST00000403255 413 ntBASIC3.34□□□□□ -1.87
CDH3P22223 OR1AA1P-201ENST00000419597 916 ntBASIC3.34□□□□□ -1.87
CDH3P22223 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH3P22223 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.34□□□□□ -1.87
CDH3P22223 BX890604.2-201ENST00000427883 474 ntBASIC3.34□□□□□ -1.87
CDH3P22223 AC097713.2-201ENST00000430199 356 ntBASIC3.34□□□□□ -1.87
CDH3P22223 MED14P1-201ENST00000430517 648 ntBASIC3.34□□□□□ -1.87
CDH3P22223 RPL23AP69-201ENST00000431134 458 ntBASIC3.34□□□□□ -1.87
CDH3P22223 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH3P22223 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH3P22223 MTND1P30-201ENST00000441241 901 ntBASIC3.34□□□□□ -1.87
CDH3P22223 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH3P22223 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.34□□□□□ -1.87
CDH3P22223 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH3P22223 AC084357.1-201ENST00000473404 255 ntBASIC3.34□□□□□ -1.87
CDH3P22223 ST13P14-201ENST00000474095 734 ntBASIC3.34□□□□□ -1.87
CDH3P22223 RPL32P34-201ENST00000486380 400 ntBASIC3.34□□□□□ -1.87
CDH3P22223 AP001025.2-201ENST00000490908 477 ntBASIC3.34□□□□□ -1.87
CDH3P22223 AC021678.1-201ENST00000505195 936 ntBASIC3.34□□□□□ -1.87
CDH3P22223 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH3P22223 RNU6-1095P-201ENST00000516148 108 ntBASIC3.34□□□□□ -1.87
CDH3P22223 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.34□□□□□ -1.87
CDH3P22223 AP003497.1-201ENST00000528472 562 ntBASIC3.34□□□□□ -1.87
CDH3P22223 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDH3P22223 AL121603.1-201ENST00000553815 142 ntBASIC3.34□□□□□ -1.87
CDH3P22223 OR4H12P-201ENST00000556269 907 ntBASIC3.34□□□□□ -1.87
CDH3P22223 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH3P22223 AC091489.2-201ENST00000566263 604 ntBASIC3.34□□□□□ -1.87
CDH3P22223 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH3P22223 MIR4307-201ENST00000582802 84 ntBASIC3.34□□□□□ -1.87
CDH3P22223 PIGPP4-201ENST00000584447 307 ntBASIC3.34□□□□□ -1.87
CDH3P22223 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH3P22223 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH3P22223 AC112187.2-201ENST00000604345 283 ntBASIC3.34□□□□□ -1.87
CDH3P22223 AL031775.1-201ENST00000607014 887 ntBASIC3.34□□□□□ -1.87
CDH3P22223 AL353748.2-201ENST00000622148 471 ntBASIC3.34□□□□□ -1.87
CDH3P22223 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDH3P22223 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms